RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SPATA5L1Q9BVQ7 753 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ARMC7Q9H6L4 198 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 TMEM185BQ9H7F4 350 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 CALHM2Q9HA72 323 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ACER3Q9NUN7 267 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 STOML1Q9UBI4 398 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 USP22Q9UPT9 525 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 GCN1Q92616 2671 aaKnown RBP12.2□□□□□ -0.46
COL1A1-208ENST00000494334 A0A0J9YW62 118 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 MBD3L4A6NDZ8 208 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 MBD3L3A6NE82 208 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 MBD3L5A6NJ08 208 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 CCT8L1PA6NM43 557 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 FAAHO00519 579 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 EIF1AYO14602 144 aaKnown RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 TPST1O60507 370 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 SERPINB7O75635 380 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 MFN2O95140 757 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 PRG2P13727 222 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 AGAP20933 346 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 SHC1P29353 583 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 PCGF2P35227 344 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 TIMP3P35625 211 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 CPA2P48052 419 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 DMTNQ08495 405 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 CDSNQ15517 529 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 CTU2Q2VPK5 515 aaKnown RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 GLIPR1L2Q4G1C9 344 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 RIPPLY2Q5TAB7 128 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 DHRS4L2Q6PKH6 230 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 XKRXQ6PP77 449 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 PLEKHM3Q6ZWE6 761 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 ARPINQ7Z6K5 226 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 LACC1Q8IV20 430 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 SLC30A8Q8IWU4 369 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 LILRA2Q8N149 483 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 TNIP2Q8NFZ5 429 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 OR10Q1Q8NGQ4 319 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 MBD3L2Q8NHZ7 208 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 SDCCAG3Q96C92 435 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 REXO5Q96IC2 774 aaKnown RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 ARL8BQ9NVJ2 186 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 CLCF1Q9UBD9 225 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 RNF6Q9Y252 685 aa12.19□□□□□ -0.46
COL1A1-208ENST00000494334 DIDO1Q9BTC0 2240 aaKnown RBP12.19□□□□□ -0.46
COL1A1-208ENST00000494334 HEATR5AQ86XA9 2040 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 A0A0G2JNJ9 132 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 PRORSD1PA6NEY8 169 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 FAM220BPB1ANY3 271 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ADAMDEC1O15204 470 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 FRS3O43559 492 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 OPN1SWP03999 348 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 GP1BBP13224 206 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ME2P23368 584 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 CEACAM8P31997 349 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 APOBEC1P41238 236 aaKnown RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 RPS3AP61247 264 aaKnown RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 MERTKQ12866 999 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 SELENBP1Q13228 472 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 VEZF1Q14119 521 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 TMEM176BQ3YBM2 270 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 INTS11Q5TA45 600 aaKnown RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ERICH5Q6P6B1 374 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ESPNLQ6ZVH7 1005 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 CCDC80Q76M96 950 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 CHMP1BQ7LBR1 199 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF550Q7Z398 422 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 GRINAQ7Z429 371 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 COMTD1Q86VU5 262 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ARMC8Q8IUR7 673 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 CCDC71Q8IV32 467 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 C9orf106Q8NAJ2 232 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 SMYD1Q8NB12 490 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 BCAS4Q8TDM0 211 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 SLC35B4Q969S0 331 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF845Q96IR2 970 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 KLHL15Q96M94 604 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 PINK1Q9BXM7 581 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 CTPS2Q9NRF8 586 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 COQ3Q9NZJ6 369 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 GMPR2Q9P2T1 348 aaKnown RBP12.18□□□□□ -0.46
COL1A1-208ENST00000494334 Q9UFV3 132 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 TAGLN3Q9UI15 199 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 AP3M1Q9Y2T2 418 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
COL1A1-208ENST00000494334 USP9XQ93008 2570 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-208ENST00000494334 A1L4Q6 167 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 NME4O00746 187 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 TNFSF11O14788 317 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 CLDN1O95832 211 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 TGM6O95932 706 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 IL2RAP01589 272 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 UQCRBP14927 111 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 SFTPDP35247 375 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 SLC1A3P43003 542 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 EIF1AXP47813 144 aaKnown RBP12.17□□□□□ -0.46
COL1A1-208ENST00000494334 SLC7A2P52569 658 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 PSME3P61289 254 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms