RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SPATA24Q86W54 205 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 PEX5LQ8IYB4 626 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 DND1Q8IYX4 353 aaKnown RBP11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF619Q8N2I2 560 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 SLC15A4Q8N697 577 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF614Q8N883 585 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ACBD4Q8NC06 268 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 DIO2Q92813 273 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 RSRC1Q96IZ7 334 aaKnown RBP11.07□□□□□ -0.64
UPF3A-210ENST00000493727 COL21A1Q96P44 957 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 RASL10BQ96S79 203 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ADOQ96SZ5 270 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 VKORC1Q9BQB6 163 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 SPATA5L1Q9BVQ7 753 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 SLC38A1Q9H2H9 487 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 SLC13A4Q9UKG4 626 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 YARS2Q9Y2Z4 477 aaKnown RBP11.07□□□□□ -0.64
UPF3A-210ENST00000493727 NPFFR2Q9Y5X5 522 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ACANP16112 2415 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 ABCA2Q9BZC7 2435 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 AKAP6Q13023 2319 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 EML6Q6ZMW3 1958 aa11.07□□□□□ -0.64
UPF3A-210ENST00000493727 NPIPA5A0A0B4J1W7 369 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 TMEM200CA6NKL6 621 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 NPIPA7E9PJI5 369 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 H0YHG0 523 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 SCDO00767 359 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 TFECO14948 347 aaPredicted RBP11.06□□□□□ -0.64
UPF3A-210ENST00000493727 KIAA0513O60268 411 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 WISP2O76076 250 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 NADKO95544 446 aaPredicted RBP11.06□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF682O95780 498 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 SERPINA1P01009 418 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 IGKV1D-16P01601 117 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 OPN1SWP03999 348 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 NPIPA8P0DM63 369 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 ATP6V1B2P21281 511 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 SSTR2P30874 369 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 KDELR2P33947 212 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 MS4A2Q01362 244 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 MAPK11Q15759 364 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 TMEM201Q5SNT2 666 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 TYW3Q6IPR3 259 aaKnown RBP11.06□□□□□ -0.64
UPF3A-210ENST00000493727 HMGN2P46Q86SG4 172 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 ARMC8Q8IUR7 673 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF527Q8NB42 609 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 FAM13CQ8NE31 585 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 BHLHE22Q8NFJ8 381 aaPredicted RBP11.06□□□□□ -0.64
UPF3A-210ENST00000493727 OR5M3Q8NGP4 307 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 FAM110BQ8TC76 370 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 TMCO6Q96DC7 493 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 SPACA9Q96E40 222 aaPredicted RBP11.06□□□□□ -0.64
UPF3A-210ENST00000493727 EAF1Q96JC9 268 aaPredicted RBP11.06□□□□□ -0.64
UPF3A-210ENST00000493727 RNF145Q96MT1 663 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 HOXD1Q9GZZ0 328 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 BCL2L10Q9HD36 194 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 FBXO34Q9NWN3 711 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 HPF1Q9NWY4 346 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 ADPRHL2Q9NX46 363 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 RPS6KA6Q9UK32 745 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 U3KQE9 123 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 V9GYQ6 96 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 VPS13CQ709C8 3753 aa11.06□□□□□ -0.64
UPF3A-210ENST00000493727 OR6C70A6NIJ9 312 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 M0QX08 132 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 TP53I11O14683 189 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 TSPAN2O60636 221 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 FCMRO60667 390 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 ICOSLGO75144 302 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 UTS2O95399 124 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 CYP4B1P13584 511 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 ETS2P15036 469 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 NAGAP17050 411 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 LCN1P31025 176 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 SOX3P41225 446 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 MEOX1P50221 254 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 ERFP50548 548 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 PNLIPRP2P54317 469 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 PCBP3P57721 371 aaKnown RBP11.05□□□□□ -0.64
UPF3A-210ENST00000493727 FBXW4P57775 412 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 RPP38P78345 283 aaKnown RBP11.05□□□□□ -0.64
UPF3A-210ENST00000493727 LARS2Q15031 903 aaKnown RBP11.05□□□□□ -0.64
UPF3A-210ENST00000493727 FXNQ16595 210 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 LIN52Q52LA3 116 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 CYBRD1Q53TN4 286 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF311Q5JNZ3 666 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 LCN8Q6JVE9 175 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 IL20RBQ6UXL0 311 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 CCDC80Q76M96 950 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 CYP4Z2PQ8N1L4 340 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 SMYD1Q8NB12 490 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 OR52P1PQ8NH57 321 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 WDR60Q8WVS4 1066 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 RASSF5Q8WWW0 418 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 LZICQ8WZA0 190 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 C14orf79Q96F83 325 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms