RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 KISS1RQ969F8 398 aaPredicted RBP19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 TNFRSF13CQ96RJ3 184 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 CDX2Q99626 313 aaPredicted RBP19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 ERVMER34-1Q9H9K5 563 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 MCCC2Q9HCC0 563 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 SMURF1Q9HCE7 757 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 SNTG1Q9NSN8 517 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 TOR4AQ9NXH8 423 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 CRNNQ9UBG3 495 aaPredicted RBP19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 SAGE2PA6NJ88 616 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 CTDSP2O14595 271 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 FOLR1P15328 257 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 TGM1P22735 817 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 GABRA5P31644 462 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 RORCP51449 518 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 C22orf42Q6IC83 251 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 QSOX2Q6ZRP7 698 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 CCDC190Q86UF4 302 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 ZFP41Q8N8Y5 198 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 CLIP3Q96DZ5 547 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 SLC41A2Q96JW4 573 aa19.4■□□□□ 0.7
CCDC88B-208ENST00000492980 A0A1W2PPC1 479 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 FUOMA2VDF0 154 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 A8MUA0 341 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 PPP1R3DO95685 299 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 GPLD1P80108 840 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 ACSM1Q08AH1 577 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 ZNF362Q5T0B9 420 aaPredicted RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 FCRLBQ6BAA4 426 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 PLEKHG7Q6ZR37 379 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 TMEM151BQ8IW70 566 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC37A3Q8NCC5 494 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 SPRYD4Q8WW59 207 aaPredicted RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 PTP4A1Q93096 173 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 C1GALT1C1Q96EU7 318 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 TM9SF2Q99805 663 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 BAIAP2Q9UQB8 552 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC35A3Q9Y2D2 325 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 ADAMTS20P59510 1910 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 PRR23D1E9PI22 279 aaPredicted RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 GNB5O14775 395 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC30A4O14863 429 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 POLR1CO15160 346 aaPredicted RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 CDRT1O95170 752 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 PRR23D2P0DMB1 279 aaPredicted RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 PAICSP22234 425 aaKnown RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 EFNA3P52797 238 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 SHBQ15464 509 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 ZNF181Q2M3W8 571 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 FNDC7Q5VTL7 733 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 LYSMD2Q8IV50 215 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 DRAXINQ8NBI3 349 aaPredicted RBP19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 FAM71CQ8NEG0 241 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC46A1Q96NT5 459 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 RERGLQ9H628 205 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 ABCB10Q9NRK6 738 aa19.39■□□□□ 0.69
CCDC88B-208ENST00000492980 CCDC182A6NF36 153 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 A8MU76 341 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 TBX1O43435 398 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 IL1AP01583 271 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC6A6P31641 620 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 PPICP45877 212 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 GPR143P51810 404 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 ZP2Q05996 745 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 DBPQ10586 325 aaPredicted RBP19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 CRTC2Q53ET0 693 aaPredicted RBP19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 ARMC4Q5T2S8 1044 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 CD200R1LQ6Q8B3 271 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 ZNF322Q6U7Q0 402 aaPredicted RBP19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 RTL4Q6ZR62 310 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 PRSS42Q7Z5A4 293 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 ZNF554Q86TJ5 538 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC43A2Q8N370 569 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 OR4C6Q8NH72 309 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 SLC25A46Q96AG3 418 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 NDC1Q9BTX1 674 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 OR8D2Q9GZM6 311 aa19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 NXF5Q9H1B4 397 aaKnown RBP19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 COLQQ9Y215 455 aaPredicted RBP19.38■□□□□ 0.69
CCDC88B-208ENST00000492980 COL5A1P20908 1838 aaPredicted RBP19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 ASXL3Q9C0F0 2248 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 A0A087WUJ7 227 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 RIIAD1A6NNX1 92 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 AKAP8O43823 692 aaKnown RBP19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 IL33O95760 270 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 DDAH2O95865 285 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 IGKV3-11P04433 115 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 MSL3P1P0C860 447 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 RANBP1P43487 201 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 BCAP31P51572 246 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 FABP5Q01469 135 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 KLHL12Q53G59 568 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 GPR135Q8IZ08 494 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 ACBD7Q8N6N7 88 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 KCTD7Q96MP8 289 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 MKKSQ9NPJ1 570 aaPredicted RBP19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 ICAM5Q9UMF0 924 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 SIT1Q9Y3P8 196 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 HEATR5AQ86XA9 2040 aa19.37■□□□□ 0.69
CCDC88B-208ENST00000492980 C12orf71A8MTZ7 269 aa19.37■□□□□ 0.69
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