RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ZNF24P17028 368 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CSRP1P21291 193 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 GPR143P51810 404 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 PDX1P52945 283 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 NKX2-5P52952 324 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 KCNJ10P78508 379 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CRYZQ08257 329 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 DAG1Q14118 895 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 HSD17B12Q53GQ0 312 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ALG10BQ5I7T1 473 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CRB2Q5IJ48 1285 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 RBM48Q5RL73 367 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ENPP6Q6UWR7 440 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 PEG10Q86TG7 708 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 AQP12AQ8IXF9 295 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF687Q8N1G0 1237 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF321PQ8N8H1 164 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CNEP1R1Q8N9A8 125 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 OR1J4Q8NGS1 313 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 OR6N1Q8NGY5 312 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 BBS10Q8TAM1 723 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF431Q8TF32 576 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZCCHC14Q8WYQ9 949 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 FCGR1BQ92637 280 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TESCQ96BS2 214 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF354BQ96LW1 612 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC46A1Q96NT5 459 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CHIAQ9BZP6 476 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 RACGAP1Q9H0H5 632 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 C1orf21Q9H246 121 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CPNE5Q9HCH3 593 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 COMMD3Q9UBI1 195 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 RAXQ9Y2V3 346 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 PCDHGB2Q9Y5G2 931 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 COL4A4P53420 1690 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 KCNE1BA0A087WTH5 132 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 A0A0X1KG70 313 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 VSTM2BA6NLU5 285 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 UPK1AO00322 258 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 UTS2O95399 124 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SYNGR4O95473 234 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ECDO95905 644 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CT62P0C5K7 136 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 FAUP35544 74 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TSFMP43897 325 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 GDI2P50395 445 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 RNF4P78317 190 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 RHDQ02161 417 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SSPNQ14714 243 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 EXOC3L2Q2M3D2 409 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CMPK2Q5EBM0 449 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SPINK14Q6IE38 97 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MFSD12Q6NUT3 480 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC30A6Q6NXT4 461 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF550Q7Z398 422 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 UBE3DQ7Z6J8 389 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 LRRC56Q8IYG6 542 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 PM20D2Q8IYS1 436 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 LGI4Q8N135 537 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MARVELD2Q8N4S9 558 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SIMC1Q8NDZ2 872 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 OR8J2Q8NGG1 315 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MOSPD2Q8NHP6 518 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC38A5Q8WUX1 472 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 GEMIN6Q8WXD5 167 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 METTL2AQ96IZ6 378 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC38A2Q96QD8 506 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TREX2Q9BQ50 279 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 BTBD2Q9BX70 525 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 UCK1Q9HA47 277 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 POLE4Q9NR33 117 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 FBXO8Q9NRD0 319 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 UBQLN4Q9NRR5 601 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 COQ3Q9NZJ6 369 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 EDARQ9UNE0 448 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 IFT52Q9Y366 437 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 LOC101059948A0A1B0GTJ6 334 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 NPIPA2E9PIF3 369 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 NPIPA3F8WFD2 350 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 EIF1AYO14602 144 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ADAMDEC1O15204 470 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ACOX3O15254 700 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TRIM3O75382 744 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CCNB2O95067 398 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 DBIP07108 87 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 UBL4AP11441 157 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 NPR2P20594 1047 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CCNOP22674 350 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MMP11P24347 488 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 DPP4P27487 766 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 FMO3P31513 532 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 NBL1P41271 181 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 OMPP47874 163 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MLLT10P55197 1068 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CTBP2P56545 445 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC26A5P58743 744 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 RAE1P78406 368 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ST3GAL3Q11203 375 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MEP1AQ16819 746 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TIGD6Q17RP2 521 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms