RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 C6orf203Q9P0P8 240 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 KLHL13Q9P2N7 655 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 PRDM4Q9UKN5 801 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 GPR45Q9Y5Y3 372 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 POLQO75417 2590 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 CCDC154A6NI56 674 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 NPIPB9F8W1W9 429 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 FCMRO60667 390 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 SCN2BO60939 215 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 SLC22A3O75751 556 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 PGRP06401 933 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 KITP10721 976 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 EPHA3P29320 983 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 AGTR1P30556 359 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 CLK1P49759 484 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 NME5P56597 212 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 NKX6-1P78426 367 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 P2RY6Q15077 328 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 GUSBP1Q15486 140 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 ACKR1Q16570 336 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 SLC25A53Q5H9E4 307 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.8□□□□□ -0.043e-8■■■■■ 44.2
PDLIM2-217ENST00000491330 SAXO2Q658L1 398 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 ANKRD34AQ69YU3 496 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 HEPHL1Q6MZM0 1159 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 TRNT1Q96Q11 434 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 PIP5K1AQ99755 562 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 ACTR6Q9GZN1 396 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 SDR39U1Q9NRG7 319 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 INTS9Q9NV88 658 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 THUMPD1Q9NXG2 353 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 CALML5Q9NZT1 146 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 DOCK7Q96N67 2140 aa14.8□□□□□ -0.04
PDLIM2-217ENST00000491330 FAM171A2A8MVW0 826 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 SULT2B1O00204 365 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 RFXANKO14593 260 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 UGT2B17O75795 530 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 ALDOCP09972 364 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 NR2F1P10589 423 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 IL7RP16871 459 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 PSMB1P20618 241 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 MAP2K6P52564 334 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 STX1BP61266 288 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 KCNJ10P78508 379 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 RASGEF1BQ0VAM2 473 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 ZSWIM7Q19AV6 140 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 TTMPQ5BVD1 217 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF550Q7Z398 422 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF100Q8IYN0 542 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 NUDT8Q8WV74 236 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 CCL19Q99731 98 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 SIKE1Q9BRV8 207 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 TMUB1Q9BVT8 246 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 MTHFD2LQ9H903 347 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 UBTD1Q9HAC8 227 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 ACER3Q9NUN7 267 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF232Q9UNY5 417 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 USH1CQ9Y6N9 552 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 FBN2P35556 2912 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 PDZD2O15018 2839 aa14.79□□□□□ -0.04
PDLIM2-217ENST00000491330 GOLGA8QA0A0J9YX86 632 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 GOLGA8OA6NCC3 632 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 GOLGA8NF8WBI6 632 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 GPR171O14626 319 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 UBDO15205 165 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 KIAA0513O60268 411 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 TMCC2O75069 709 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 RYKP34925 604 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 RNF144AP50876 292 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 SESN3P58005 492 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 SKP2Q13309 424 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 EPGNQ6UW88 154 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 STAC2Q6ZMT1 411 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 PLEKHM3Q6ZWE6 761 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 GRINAQ7Z429 371 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 WFDC8Q8IUA0 241 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 TUSC5Q8IXB3 177 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 PEX5LQ8IYB4 626 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF440Q8IYI8 595 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 LRRC75A-AS1Q8N1F1 130 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 CLEC4FQ8N1N0 589 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 ABHD3Q8WU67 409 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 HSD17B8Q92506 261 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 RAB8BQ92930 207 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 KISS1RQ969F8 398 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 MUCL1Q96DR8 90 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 CCDC28BQ9BUN5 200 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 SAP130Q9H0E3 1048 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 RAD21L1Q9H4I0 556 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 ESRP2Q9H6T0 727 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 EXOSC3Q9NQT5 275 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 MRGBPQ9NV56 204 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 SPG11Q96JI7 2443 aa14.78□□□□□ -0.04
PDLIM2-217ENST00000491330 PCNX3Q9H6A9 2034 aa14.77□□□□□ -0.04
PDLIM2-217ENST00000491330 POLR3GO15318 223 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 DNPH1O43598 174 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 H6PDO95479 791 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 DBIP07108 87 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 CD53P19397 219 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 CASP9P55211 416 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms