RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 FOXRED2Q8IWF2 684 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 KLHDC8AQ8IYD2 350 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 GJD3Q8N144 294 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 AMDHD1Q96NU7 426 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 OR1F2PQ96R84 312 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 TRPV4Q9HBA0 871 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 NOX4Q9NPH5 578 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 OR2S2Q9NQN1 319 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 TRAV18A0A075B6X5 111 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 MEIKINA0A087WXM9 373 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SLC22A31A6NKX4 558 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ZNF879B4DU55 563 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 KRBOX1C9JBD0 128 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 BLOC1S5-TXNDC5H3BN57 136 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SURF4O15260 269 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 FARS2O95363 451 aaKnown RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SELPP16109 830 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 IRS1P35568 1242 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 LIMS1P48059 325 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 PXNP49023 591 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 PDX1P52945 283 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SKP1P63208 163 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 MRPL58Q14197 206 aaKnown RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 PON3Q15166 354 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 TMUB2Q71RG4 321 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 TMEFF1Q8IYR6 380 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 BEST3Q8N1M1 668 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 STPG2Q8N412 459 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SLC16A11Q8NCK7 471 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 OR52N1Q8NH53 320 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 YIPF5Q969M3 257 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SCMH1Q96GD3 660 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 HS6ST2Q96MM7 605 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 LMF1Q96S06 567 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 GDF15Q99988 308 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 LMAN2LQ9H0V9 348 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 HRASLSQ9HDD0 168 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 MRPS30Q9NP92 439 aaKnown RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 KLHL42Q9P2K6 505 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 KCND3Q9UK17 655 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 OR51B4Q9Y5P0 310 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 MYO16Q9Y6X6 1858 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 DOCK4Q8N1I0 1966 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ELOA3DA6NLF2 546 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 AGAP14A8MT82 685 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 F5H5P2 479 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 TPPPO94811 219 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ACADLP28330 430 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 CCR9P51686 369 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 NKPD1Q17RQ9 610 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ELOA3BQ3SY89 546 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 CCDC157Q569K6 752 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 PRAMEF17Q5VTA0 474 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ELOA3Q8NG57 546 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 GOT1L1Q8NHS2 421 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 C3orf49Q96BT1 292 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 WDR89Q96FK6 387 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SRA1Q9HD15 236 aaKnown RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 CA10Q9NS85 328 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 CBLCQ9ULV8 474 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ATG4BQ9Y4P1 393 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 C5orf51A6NDU8 294 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 AGPAT2O15120 278 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 EGFP01133 1207 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 C8AP07357 584 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TFPIP10646 304 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 PRLHRP49683 370 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 METAP1P53582 386 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 LINC00303Q3SY05 128 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ADGRG3Q86Y34 549 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 DCUN1D3Q8IWE4 304 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 LRRC56Q8IYG6 542 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CHST4Q8NCG5 386 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 OR56A1Q8NGH5 318 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ZNF558Q96NG5 402 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 FOXN4Q96NZ1 517 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CASD1Q96PB1 797 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 C12orf57Q99622 126 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 PINK1Q9BXM7 581 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ZMAT3Q9HA38 289 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 SLC6A20Q9NP91 592 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 HCFC1R1Q9NWW0 138 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 SIDT1Q9NXL6 827 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ACTR10Q9NZ32 417 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 BPTFQ12830 3046 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 SLC5A10A0PJK1 596 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 OR52A4PA6NMU1 304 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TMEM189-UBE2V1I3L0A0 370 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CACNB4O00305 520 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CDC42EP2O14613 210 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 LCMT2O60294 686 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ATG12O94817 140 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 FAM83HQ6ZRV2 1179 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 RNF165Q6ZSG1 346 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 PLA2G15Q8NCC3 412 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 BRIX1Q8TDN6 353 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ALG14Q96F25 216 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ADAD1Q96M93 576 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TEAD3Q99594 435 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms