RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 MUS81Q96NY9 551 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 OR5B2Q96R09 309 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 TRMOQ9BU70 441 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 IQCGQ9H095 443 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 ANKZF1Q9H8Y5 726 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 FKRPQ9H9S5 495 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 ZDHHC18Q9NUE0 388 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 GIN1Q9NXP7 522 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 TAS2R16Q9NYV7 291 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 TMEM216Q9P0N5 145 aa11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTDSP1-210ENST00000491064 RSL1D1O76021 490 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 ATP5F1P24539 256 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 NTF4P34130 210 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 FRKP42685 505 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 DIO1P49895 249 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 PRKAA2P54646 552 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 FOXG1P55316 489 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 PDK3Q15120 406 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 CARTPTQ16568 116 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 FAM174BQ3ZCQ3 159 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 OR7E24Q6IFN5 339 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 BHLHB9Q6PI77 547 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 TRIM46Q7Z4K8 759 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 WDR31Q8NA23 367 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 ZNF527Q8NB42 609 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 DCAKDQ8WVC6 231 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 CDS1Q92903 461 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 APH1AQ96BI3 265 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 L3HYPDHQ96EM0 354 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 STACQ99469 402 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 BPESC1Q9GZL8 116 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 GSTO2Q9H4Y5 243 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 MYOZ1Q9NP98 299 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 ASB6Q9NWX5 421 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 EMC3Q9P0I2 261 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 MALT1Q9UDY8 824 aa11.94□□□□□ -0.5
CTDSP1-210ENST00000491064 ZNF716A6NP11 495 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ESPNB1AK53 854 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 NPIPB8E9PQR5 432 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ATP6V1G2-DDX39BF2Z307 99 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 H3BNH8 94 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 GTPBP1O00178 669 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 TBX19O60806 448 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ITGA5P08648 1049 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 EGR1P18146 543 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ATP6V1C1P21283 382 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 SLC25A3Q00325 362 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 QPRTQ15274 297 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 TIGD2Q4W5G0 525 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 TMPPEQ6ZT21 453 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 SLC22A9Q8IVM8 553 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ANKS4BQ8N8V4 417 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ZNF540Q8NDQ6 660 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 OR5W2Q8NH69 310 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 FAM120BQ96EK7 910 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 HOXD1Q9GZZ0 328 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 QRSL1Q9H0R6 528 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 PIGUQ9H490 435 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ACSS1Q9NUB1 689 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 TMEFF2Q9UIK5 374 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 ZNF180Q9UJW8 692 aa11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 NOSIPQ9Y314 301 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-210ENST00000491064 TGP01266 2768 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 LRP5LA4QPB2 252 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 POC1B-GALNT4F8VUJ3 575 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 NPIPB9F8W1W9 429 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 PDLIM1O00151 329 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 SULT2B1O00204 365 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 AKAP10O43572 662 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 VENTXO95231 258 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 HMGN2P05204 90 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 ATP12AP54707 1039 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 CSNK2A1P68400 391 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 SLC7A5Q01650 507 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 PDE7AQ13946 482 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 CBFBQ13951 182 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 LASP1Q14847 261 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 CDC73Q6P1J9 531 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 MTDHQ86UE4 582 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 RELL1Q8IUW5 271 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 TMCO5AQ8N6Q1 288 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 TOR1AIP2Q8NFQ8 470 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 OR52E4Q8NGH9 312 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 RFWD2Q8NHY2 731 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 ARL8AQ96BM9 186 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 PPCDCQ96CD2 204 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 ZMYND19Q96E35 227 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 CHMP6Q96FZ7 201 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 METTL2AQ96IZ6 378 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 BHLHE41Q9C0J9 482 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 CDC42EP4Q9H3Q1 356 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 REEP4Q9H6H4 257 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 RRAGDQ9NQL2 400 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 SLC17A5Q9NRA2 495 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 SIRT3Q9NTG7 399 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms