RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TCEA1P23193 301 aaKnown RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 ELK4P28324 431 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 ADH6P28332 368 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 CHI3L1P36222 383 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 EIF1AXP47813 144 aaKnown RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 SUCLG1P53597 346 aaKnown RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 SUMO3P55854 103 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 STX1BP61266 288 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 SIRPAP78324 504 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 GUSBP1Q15486 140 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 AGKQ53H12 422 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 SAXO2Q658L1 398 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 CGB2Q6NT52 195 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 TNFAIP8L2Q6P589 184 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 BLOC1S3Q6QNY0 202 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 SSX8Q7RTT4 187 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 CXorf67Q86X51 503 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 WFDC11Q8NEX6 87 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 XAGE5Q8WWM1 108 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 RAB8BQ92930 207 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 NEURL3Q96EH8 262 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 PIK3IP1Q96FE7 263 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 SLC35G5Q96KT7 338 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 SLC35A5Q9BS91 424 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 TMEM120AQ9BXJ8 343 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 HDHD5Q9BXW7 423 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 OPN3Q9H1Y3 402 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 OR51I1Q9H343 314 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 GP6Q9HCN6 339 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 NGBQ9NPG2 151 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 SLC52A3Q9NQ40 469 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 KLHL28Q9NXS3 571 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 CCDC167Q9P0B6 97 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 ARL2BPQ9Y2Y0 163 aa9.29□□□□□ -0.92
TTC28-207ENST00000490475 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
TTC28-207ENST00000490475 ROS1P08922 2347 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 NPIPA5A0A0B4J1W7 369 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 VGLL3A8MV65 326 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 DEFB108AA8MXU0 73 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 NPIPA7E9PJI5 369 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 GMFGO60234 142 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 FCMRO60667 390 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 SS18L1O75177 396 aaPredicted RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 NPIPA8P0DM63 369 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 MRPL19P49406 292 aaKnown RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 CLDN20P56880 219 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 LRRC74AQ0VAA2 488 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 RNPS1Q15287 305 aaKnown RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 GTDC1Q4AE62 458 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 Q5PR19 223 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 COX20Q5RI15 118 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 DCST2Q5T1A1 773 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 SLC2A7Q6PXP3 512 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 PLEKHM3Q6ZWE6 761 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 GGNQ86UU5 652 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 RNF130Q86XS8 419 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 ZNF610Q8N9Z0 462 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 GATSQ8NAP1 163 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 OR10D3Q8NH80 312 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 PNPT1Q8TCS8 783 aaKnown RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 MIPOL1Q8TD10 442 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 GTF2H4Q92759 462 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 CPNE4Q96A23 557 aaPredicted RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 ITCHQ96J02 903 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 SDF2Q99470 211 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 CXorf56Q9H5V9 222 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 C6orf203Q9P0P8 240 aaPredicted RBP9.28□□□□□ -0.92
TTC28-207ENST00000490475 SLAMF8Q9P0V8 285 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 VDAC3Q9Y277 283 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 GPR52Q9Y2T5 361 aa9.28□□□□□ -0.92
TTC28-207ENST00000490475 PRAMEF27A3QJZ7 478 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 DUXAA6NLW8 204 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 HMGN4O00479 90 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 NR5A2O00482 541 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ANP32DO95626 131 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 HEXAP06865 529 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 TROVE2P10155 538 aaKnown RBP eCLIP9.27□□□□□ -0.93
TTC28-207ENST00000490475 PSMB1P20618 241 aaKnown RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 ATP4BP51164 291 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ARFIP2P53365 341 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ELF3P78545 371 aaPredicted RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 LTBQ06643 244 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 BNIP1Q12981 228 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 SQLEQ14534 574 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 GPR68Q15743 365 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 PLPPR5Q32ZL2 321 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ARHGAP11BQ3KRB8 267 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 KLHL26Q53HC5 615 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 PAGE3Q5JUK9 113 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 C6orf10Q5SRN2 563 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 HBMQ6B0K9 141 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 PPP4R4Q6NUP7 873 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 PLXDC2Q6UX71 529 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 DNAJC14Q6Y2X3 702 aaPredicted RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 SLC43A2Q8N370 569 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms