RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FCRL1Q96LA6 429 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 ZNF300Q96RE9 604 aaPredicted RBP7.2□□□□□ -1.26
USP39-216ENST00000490193 STACQ99469 402 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 INPP5KQ9BT40 448 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 BTBD2Q9BX70 525 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 GSTO2Q9H4Y5 243 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 TMEM216Q9P0N5 145 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 MALT1Q9UDY8 824 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 POU2F3Q9UKI9 436 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 CCL27Q9Y4X3 112 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 PMF1-BGLAPU3KQ54 211 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 DYSFO75923 2080 aa7.2□□□□□ -1.26
USP39-216ENST00000490193 A0A1W2PNR3 127 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 ESYT3A0FGR9 886 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 ESPNB1AK53 854 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 NPIPB9F8W1W9 429 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 H3BNH8 94 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 DNAJA2O60884 412 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 RAD51DO75771 328 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 H6PDO95479 791 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 NUDT14O95848 222 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 SNRPAP09012 282 aaKnown RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 APOBEC3AP31941 199 aaPredicted RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 PDLIM4P50479 330 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 ZNF83P51522 516 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 PRKAG1P54619 331 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 NAA20P61599 178 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 POU6F2P78424 691 aaPredicted RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 MLC1Q15049 377 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 GABRA6Q16445 453 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 IMPG1Q17R60 797 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 SWI5Q1ZZU3 235 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 ZNF385BQ569K4 471 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 TEX35Q5T0J7 233 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP39-216ENST00000490193 CCNJQ5T5M9 372 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 OR7E24Q6IFN5 339 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 C3orf33Q6P1S2 294 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 TIFABQ6ZNK6 161 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 ZNF100Q8IYN0 542 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 TOR1AIP2Q8NFQ8 470 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 OR52N5Q8NH56 324 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 FBXO30Q8TB52 745 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 CIDECQ96AQ7 238 aaPredicted RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 ZNF524Q96C55 264 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 C16orf58Q96GQ5 468 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 MUS81Q96NY9 551 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 CCT7Q99832 543 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 PIMREGQ9BSJ6 248 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 HOXD1Q9GZZ0 328 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 CDC42EP4Q9H3Q1 356 aaKnown RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 PIGUQ9H490 435 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 CHODLQ9H9P2 273 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 FKRPQ9H9S5 495 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 EML4Q9HC35 981 aaKnown RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 MYOZ1Q9NP98 299 aaPredicted RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 RRAGDQ9NQL2 400 aaPredicted RBP7.19□□□□□ -1.26
USP39-216ENST00000490193 TAS2R16Q9NYV7 291 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 CARD8Q9Y2G2 431 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 FKBP7Q9Y680 259 aa7.19□□□□□ -1.26
USP39-216ENST00000490193 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 LOC390937A0A1W2PQ73 354 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 CIB4A0PJX0 185 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 ZNF716A6NP11 495 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 C9JVG2 144 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 PDLIM1O00151 329 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 KCNAB3O43448 404 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 SPRY1O43609 319 aaPredicted RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 TCF21O43680 179 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 EIF4E2O60573 245 aaKnown RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 LY6HO94772 140 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 HMGN2P05204 90 aaKnown RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 APEHP13798 732 aaKnown RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 ZNF23P17027 643 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 SLC16A1P53985 500 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 ATP12AP54707 1039 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 PHC1P78364 1004 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 GGTLC2Q14390 218 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 MST1LQ2TV78 715 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 ANKRD26P1Q6NSI1 321 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 LRIG3Q6UXM1 1119 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 RNF165Q6ZSG1 346 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 SZRD1Q7Z422 152 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 MTDHQ86UE4 582 aaKnown RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 C17orf78Q8N4C9 275 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 C1orf162Q8NEQ5 155 aaPredicted RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 OR5W2Q8NH69 310 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 ST8SIA1Q92185 356 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 ARL8AQ96BM9 186 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 PPCDCQ96CD2 204 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 MTERF3Q96E29 417 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 FAM120BQ96EK7 910 aaKnown RBP7.18□□□□□ -1.26
USP39-216ENST00000490193 SORCS2Q96PQ0 1159 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 PLA2G12AQ9BZM1 189 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 TSPYL1Q9H0U9 437 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 REEP4Q9H6H4 257 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 ANKZF1Q9H8Y5 726 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 MID1IP1Q9NPA3 183 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 SIRT3Q9NTG7 399 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms