RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SLC35G5Q96KT7 338 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 BCO1Q9HAY6 547 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PRSS51A0A1B0GVH4 220 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 H7C1Q1 480 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SMAD9O15198 467 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 LY6G6DO95868 133 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 AK1P00568 194 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 GUSBP08236 651 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 MYZAPP0CAP1 466 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 OR12D1P0DN82 309 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SLC1A6P48664 564 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PTH2RP49190 550 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RPL14P50914 215 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 NR1H2P55055 460 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SESN3P58005 492 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CASP8Q14790 479 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TYW3Q6IPR3 259 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TMCO5AQ8N6Q1 288 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 STEAP2Q8NFT2 490 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 OR4A15Q8NGL6 344 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TESCQ96BS2 214 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 REXO5Q96IC2 774 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TEX37Q96LM6 180 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 HDHD5Q9BXW7 423 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 DPY30Q9C005 99 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SAP130Q9H0E3 1048 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF701Q9NV72 531 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TRIM64A6NGJ6 449 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TRIM64BA6NI03 449 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 HS3ST1O14792 307 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TM9SF1O15321 606 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RGS16O15492 202 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 KIAA0513O60268 411 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CYTIPO60759 359 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ADAP00813 363 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 HEXAP06865 529 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 BGNP21810 368 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 UQCRC2P22695 453 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PGM1P36871 562 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CCR4P51679 360 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CAPRIN1Q14444 709 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TAB1Q15750 504 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SAXO2Q658L1 398 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ATG4DQ86TL0 474 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SLC43A2Q8N370 569 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF611Q8N823 705 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ST8SIA1Q92185 356 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RAB8BQ92930 207 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZBTB9Q96C00 473 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PNPOQ9NVS9 261 aa17.22■□□□□ 0.35
TNFRSF1B-202ENST00000489921 C9JVG2 144 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ADAM11O75078 769 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CPSF4O95639 269 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CSTAP01040 98 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ALDOCP09972 364 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 UBTFL6P0CB48 400 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 OR3A2P47893 321 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SPANXN4Q5MJ08 99 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 NCMAPQ5T1S8 102 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ADAM5Q6NVV9 412 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 C3orf33Q6P1S2 294 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 FRRS1Q6ZNA5 592 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 LSRQ86X29 649 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 LRRC34Q8IZ02 419 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 XAGE5Q8WWM1 108 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF775Q96BV0 537 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 NEURL3Q96EH8 262 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 OR5B2Q96R09 309 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF300Q96RE9 604 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 NUF2Q9BZD4 464 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 MEAF6Q9HAF1 191 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ACER3Q9NUN7 267 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PRSS50Q9UI38 385 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CADP27708 2225 aa17.21■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ANK3Q12955 4377 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CYP7B1O75881 506 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 IL12AP29459 219 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SLC7A1P30825 629 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 RASGEF1BQ0VAM2 473 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ITGADQ13349 1161 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 P2RY6Q15077 328 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ANXA8L1Q5VT79 327 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TNFAIP8L2Q6P589 184 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 Q6ZT83 130 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 EIF3MQ7L2H7 374 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 C16orf62Q7Z3J2 963 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 AKAP1Q92667 903 aaKnown RBP eCLIP17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ROPN1LQ96C74 230 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 BDH2Q9BUT1 245 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CCDC106Q9BWC9 280 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 EXD2Q9NVH0 621 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 KLHL9Q9P2J3 617 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 PCDHGB4Q9UN71 923 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ABCA2Q9BZC7 2435 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CSPG4Q6UVK1 2322 aa17.2■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 HMGN4O00479 90 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SNUPNO95149 360 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms