RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NPSR1Q6W5P4 371 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF783Q6ZMS7 281 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ETV3LQ6ZN32 361 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 C20orf204Q6ZNR8 217 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 C1orf229Q6ZS94 237 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 WDR53Q7Z5U6 358 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 BCDIN3DQ7Z5W3 292 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF546Q86UE3 836 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NR2C2APQ86WQ0 139 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ANGPTL5Q86XS5 388 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TGIF2LXQ8IUE1 241 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CPXCR1Q8N123 301 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 KCNRGQ8N5I3 272 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 AVL9Q8NBF6 648 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR8J2Q8NGG1 315 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 SMIM4Q8WVI0 70 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 FGF11Q92914 225 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ARL11Q969Q4 196 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB24Q969Q5 203 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC22A18Q96BI1 424 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 C14orf79Q96F83 325 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 LINGO1Q96FE5 620 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MISP3Q96FF7 219 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 RBM18Q96H35 190 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TSSK3Q96PN8 268 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TEFMQ96QE5 360 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TAAR9Q96RI9 348 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CDCA3Q99618 268 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 COPS8Q99627 209 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MGME1Q9BQP7 344 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 GPR61Q9BZJ8 451 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TKTL2Q9H0I9 626 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 AP5M1Q9H0R1 490 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PRDM13Q9H4Q3 707 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MYOZ1Q9NP98 299 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CRTAC1Q9NQ79 661 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MIEF1Q9NQG6 463 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 UQCC1Q9NVA1 299 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PARPBPQ9NWS1 579 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 FLRT1Q9NZU1 646 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ABRACLQ9P1F3 81 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 KCND3Q9UK17 655 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ST3GAL5Q9UNP4 418 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR10H1Q9Y4A9 318 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PCDHGA5Q9Y5G8 931 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PCDHGA1Q9Y5H4 931 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NRXN2Q9P2S2 1712 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 SSC5DA1L4H1 1573 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MYLKQ15746 1914 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ELOA3CA0A087WX78 387 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 IGKV6-21A0A0C4DH24 114 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CCDC163A0A0D9SF12 145 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 KANTRA0A1W2PQU2 76 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GSAPA4D1B5 854 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 URADA6NGE7 173 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ELOA3DA6NLF2 546 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 KDM4EB2RXH2 506 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TSTD3H0UI37 97 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 H7C0S8 307 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 J3KTA2 159 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FAAHO00519 579 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF749O43361 778 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MBTPS2O43462 519 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2T1O43869 369 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SH3BGRLO75368 114 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC25A12O75746 678 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FGF19O95750 216 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C1QCP02747 245 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 IFNW1P05000 195 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ITGB2P05107 769 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 RHOP08100 348 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PAX1P15863 534 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 DPEP1P16444 411 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SDC1P18827 310 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TNFRSF1BP20333 461 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ACHEP22303 614 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TACR1P25103 407 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PDHA2P29803 388 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 AQP1P29972 269 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CCND3P30281 292 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FEN1P39748 380 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GDNFP39905 211 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CRATP43155 626 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CDX1P47902 265 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MTNR1AP48039 350 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 DGKGP49619 791 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ARL4DP49703 201 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CCR8P51685 355 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NRG3P56975 720 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 H2BFSP57053 126 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SMIM11AP58511 58 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 HNRNPKP61978 463 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 BCL2L1Q07817 233 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLBPQ14493 270 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 HNF4GQ14541 408 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF345Q14585 488 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TTLL4Q14679 1199 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GINS1Q14691 196 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TRAM1Q15629 374 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms