RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TGP01266 2768 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 IGKV3D-15A0A087WSY6 115 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 PDPK1O15530 556 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 ITGA5P08648 1049 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 IMPDH1P20839 514 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 COMPP49747 757 aaPredicted RBP14.14□□□□□ -0.15
USP48-210ENST00000489108 DIO1P49895 249 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 FOXA1P55317 472 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 IMPG1Q17R60 797 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 ZNF385BQ569K4 471 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 EXOSC6Q5RKV6 272 aaKnown RBP14.14□□□□□ -0.15
USP48-210ENST00000489108 C9orf135Q5VTT2 229 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 IKBIPQ70UQ0 350 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 LINC01356Q8N9X3 169 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 SPATA4Q8NEY3 305 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 SEMA6DQ8NFY4 1073 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 ZFAND2BQ8WV99 257 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 JADE3Q92613 823 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 CDS1Q92903 461 aa14.14□□□□□ -0.15
USP48-210ENST00000489108 QRSL1Q9H0R6 528 aaKnown RBP14.14□□□□□ -0.15
USP48-210ENST00000489108 A0A0A6YYJ9 748 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 CCDC151A5D8V7 595 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 SLCO1B7G3V0H7 640 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 H3BNH8 94 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 SLU7O95391 586 aaKnown RBP14.13□□□□□ -0.15
USP48-210ENST00000489108 STAMBPO95630 424 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 HSPA4LO95757 839 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 INHBAP08476 426 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 TAC1P20366 129 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 PKNOX1P55347 436 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 SNRPD2P62316 118 aaKnown RBP14.13□□□□□ -0.15
USP48-210ENST00000489108 ACTG1P63261 375 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 SLC25A3Q00325 362 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 C2orf54Q08AI8 447 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 LCP2Q13094 533 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 QPRTQ15274 297 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 ZSWIM7Q19AV6 140 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 TIGD2Q4W5G0 525 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP48-210ENST00000489108 ZCCHC12Q6PEW1 402 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 TMPPEQ6ZT21 453 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 SLC46A3Q7Z3Q1 461 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 MTDHQ86UE4 582 aaKnown RBP14.13□□□□□ -0.15
USP48-210ENST00000489108 OR52E4Q8NGH9 312 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 FAM76AQ8TAV0 307 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 CHMP6Q96FZ7 201 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 EMC3Q9P0I2 261 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 TMEM216Q9P0N5 145 aa14.13□□□□□ -0.15
USP48-210ENST00000489108 ZNF716A6NP11 495 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 ESPNB1AK53 854 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 TRIM49D1C9J1S8 452 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 SULT2B1O00204 365 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 LILRA1O75019 489 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 ATP6V1C1P21283 382 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 APEX1P27695 318 aaKnown RBP14.12□□□□□ -0.15
USP48-210ENST00000489108 PHBP35232 272 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 SERPINF1P36955 418 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 SERPINB9P50453 376 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 CHN2P52757 468 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 PDK3Q15120 406 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 ABLIM2Q6H8Q1 611 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 C3orf33Q6P1S2 294 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 RINLQ6ZS11 566 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 ZNF527Q8NB42 609 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 OR5W2Q8NH69 310 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 ZFP28Q8NHY6 868 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 GCDHQ92947 438 aaPredicted RBP14.12□□□□□ -0.15
USP48-210ENST00000489108 HOXD1Q9GZZ0 328 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 IQCGQ9H095 443 aaKnown RBP14.12□□□□□ -0.15
USP48-210ENST00000489108 METTL17Q9H7H0 456 aaPredicted RBP14.12□□□□□ -0.15
USP48-210ENST00000489108 SLC17A5Q9NRA2 495 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 NINJ2Q9NZG7 142 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 SH3BP4Q9P0V3 963 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 MALT1Q9UDY8 824 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 STK38LQ9Y2H1 464 aa14.12□□□□□ -0.15
USP48-210ENST00000489108 TMEM89A2RUT3 159 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 PDLIM1O00151 329 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 ETV2O00321 342 aaPredicted RBP14.11□□□□□ -0.15
USP48-210ENST00000489108 AKAP10O43572 662 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 MRPL33O75394 65 aaKnown RBP14.11□□□□□ -0.15
USP48-210ENST00000489108 TACSTD2P09758 323 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 EFNA1P20827 205 aaPredicted RBP14.11□□□□□ -0.15
USP48-210ENST00000489108 CCR4P51679 360 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 ATP12AP54707 1039 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 KIAA0040Q15053 153 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 CDC73Q6P1J9 531 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 TRIM46Q7Z4K8 759 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 TMCO5AQ8N6Q1 288 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 ZNF614Q8N883 585 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 TOR1AIP2Q8NFQ8 470 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 HPS1Q92902 700 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 ARL8AQ96BM9 186 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 DNAJA3Q96EY1 480 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 SNX18Q96RF0 628 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 PAFAH2Q99487 392 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 RAB17Q9H0T7 212 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 PIGUQ9H490 435 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 MID1IP1Q9NPA3 183 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 DUSP22Q9NRW4 184 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 AMDHD2Q9Y303 409 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms