RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 NUAK2Q9H093 628 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 OR52D1Q9H346 318 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 UBQLN3Q9H347 655 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 DSN1Q9H410 356 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 C12orf10Q9HB07 376 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 HHATLQ9HCP6 504 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CMC2Q9NRP2 79 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 STARD5Q9NSY2 213 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TMEM74BQ9NUR3 256 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 FAIMQ9NVQ4 179 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 DNAJB12Q9NXW2 375 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TNFRSF10DQ9UBN6 386 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 COPS7AQ9UBW8 275 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 KLHL21Q9UJP4 597 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ERVK-19Q9WJR5 959 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CAB39Q9Y376 341 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SIT1Q9Y3P8 196 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 PCDHGB7Q9Y5F8 929 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 PCDHGB6Q9Y5F9 930 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CLCA3PQ9Y6N3 262 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 RNF215Q9Y6U7 377 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 NUP214P35658 2090 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 A0A1B0GWA3 101 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 A0A1B0GX78 115 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 FRG2CA6NGY1 282 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PRR23D1E9PI22 279 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF670-ZNF695F2Z2N8 137 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 TMX2-CTNND1H3BSU7 103 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 K7ESF4 209 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SCDO00767 359 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SULT1C4O75897 302 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 NDUFB2O95178 105 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 LYPD3O95274 346 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 IL33O95760 270 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 THY1P04216 161 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HLA-DPB1P04440 258 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 NGFRP08138 427 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 IGFBP1P08833 259 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HBQ1P09105 142 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ANKRD34CP0C6C1 535 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 OCM2P0CE71 109 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 OCMP0CE72 109 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PRR23D2P0DMB1 279 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 CT45A8P0DMV1 189 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 CT45A9P0DMV2 189 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PEPDP12955 493 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 FOSL2P15408 326 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 FUT4P22083 530 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 CFL1P23528 166 aaKnown RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 MAOBP27338 520 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HTR2AP28223 471 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 FGF9P31371 208 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SSTR4P31391 388 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 GABRA5P31644 462 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ETV6P41212 452 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SLC1A3P43003 542 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 CSNK1EP49674 416 aaKnown RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PGDP52209 483 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 DEFA1P59665 94 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 DEFA3P59666 94 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PRPS1P60891 318 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 RAC1P63000 192 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ACTC1P68032 377 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ACTA1P68133 377 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 MLLT1Q03111 559 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ITGADQ13349 1161 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ISXQ2M1V0 245 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 TRIM16LQ309B1 348 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 CT45A2Q5DJT8 189 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SPANXN2Q5MJ10 180 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PDZK1Q5T2W1 519 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 LCN1P1Q5VSP4 162 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 LYSMD4Q5XG99 296 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HLA-DQA1Q5Y7H0 255 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 WBP2NLQ6ICG8 309 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SLC30A6Q6NXT4 461 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HSDL2Q6YN16 418 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 C20orf204Q6ZNR8 217 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 MEPCEQ7L2J0 689 aaKnown RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 RABEPKQ7Z6M1 372 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HMGN2P46Q86SG4 172 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 OAFQ86UD1 273 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 IGFN1Q86VF2 1251 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SFTPA2Q8IWL1 248 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PHC2Q8IXK0 858 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 GPALPP1Q8IXQ4 340 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 DEFB119Q8N690 84 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 ACBD7Q8N6N7 88 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 BCORP1Q8N888 145 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 RCBTB1Q8NDN9 531 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 C17orf47Q8NEP4 570 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 OR4Q3Q8NH05 313 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 C16orf52Q8NHV5 167 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 HAVCR2Q8TDQ0 301 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 CNOT9Q92600 299 aaKnown RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 RPL3LQ92901 407 aaKnown RBP6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SGTBQ96EQ0 304 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 SAMD8Q96LT4 415 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 KCTD7Q96MP8 289 aa6.1□□□□□ -1.43
HDLBP-243ENST00000488923 PTCHD1Q96NR3 888 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms