RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 TBX5Q99593 518 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 TTYH2Q9BSA4 534 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 C8orf33Q9H7E9 229 aaPredicted RBP13.12□□□□□ -0.31
ABCB1-207ENST00000488737 FOLH1BQ9HBA9 442 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 CYSLTR2Q9NS75 346 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.12□□□□□ -0.31
ABCB1-207ENST00000488737 DNAJB12Q9NXW2 375 aaKnown RBP13.12□□□□□ -0.31
ABCB1-207ENST00000488737 PIAS3Q9Y6X2 628 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 TRAV27A0A087WT01 109 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 A0A0B4J293 547 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 FAM25AB3EWG3 89 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 FAM25CB3EWG5 89 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 FAM25GB3EWG6 89 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 RDH16O75452 317 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 REM1O75628 298 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 RFPL3O75679 317 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 PPP1R3DO95685 299 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 SEMA4FO95754 770 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 CSF2P04141 144 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 CHRNB1P11230 501 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 IL9P15248 144 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 S1PR1P21453 382 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
ABCB1-207ENST00000488737 PSG6Q00889 435 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 CRMP1Q14194 572 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 LINC00114Q6XXX2 140 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 ZNF550Q7Z398 422 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 OAFQ86UD1 273 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 SLC22A18ASQ8N1D0 253 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 ARHGEF39Q8N4T4 335 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 Q8N9G6 341 aaPredicted RBP13.12□□□□□ -0.31
ABCB1-207ENST00000488737 GRHL3Q8TE85 626 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 SMPDL3BQ92485 455 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 RNF31Q96EP0 1072 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.31
ABCB1-207ENST00000488737 OR51V1Q9H2C8 321 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 MALT1Q9UDY8 824 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 SERTAD3Q9UJW9 196 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 POMT2Q9UKY4 750 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 NOX1Q9Y5S8 564 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 SZT2Q5T011 3432 aa13.12□□□□□ -0.31
ABCB1-207ENST00000488737 RFXAPO00287 272 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 SC5DO75845 299 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 GABRG2P18507 467 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ELK1P19419 428 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 RBMS1P29558 406 aaKnown RBP13.11□□□□□ -0.31
ABCB1-207ENST00000488737 INPP1P49441 399 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 CCR5P51681 352 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 PSMD4P55036 377 aaKnown RBP13.11□□□□□ -0.31
ABCB1-207ENST00000488737 CLDN20P56880 219 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 SKP1P63208 163 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 MRPS15P82914 257 aaKnown RBP13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ZNF85Q03923 595 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ZNF141Q15928 474 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 TIGD3Q6B0B8 471 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ARMC6Q6NXE6 501 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ARL9Q6T311 187 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
ABCB1-207ENST00000488737 PXKQ7Z7A4 578 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 NR2C2APQ86WQ0 139 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 CMIPQ8IY22 773 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 MS4A15Q8N5U1 240 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 OR51A7Q8NH64 312 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 RPLP0P6Q8NHW5 317 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ART5Q96L15 291 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ERVMER34-1Q9H9K5 563 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 MCCC2Q9HCC0 563 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 KLHL21Q9UJP4 597 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 ZMIZ1Q9ULJ6 1067 aa13.11□□□□□ -0.31
ABCB1-207ENST00000488737 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 DVL2O14641 736 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 YES1P07947 543 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 NOS3P29474 1203 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 THBS2P35442 1172 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 TALDO1P37837 337 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 RFX3P48380 749 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 EMDP50402 254 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 SLC16A1P53985 500 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 NRG3P56975 720 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 IGLV3-21P80748 117 aaPredicted RBP13.1□□□□□ -0.31
ABCB1-207ENST00000488737 FHL1Q13642 323 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 FGFBP1Q14512 234 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 CDK10Q15131 360 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 ALG10BQ5I7T1 473 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 DMKNQ6E0U4 476 aaPredicted RBP13.1□□□□□ -0.31
ABCB1-207ENST00000488737 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 DGAT2L6Q6ZPD8 337 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 TCTE3Q8IZS6 198 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 SLC44A3Q8N4M1 653 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 ADAMTS18Q8TE60 1221 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 VSTM2LQ96N03 204 aa13.1□□□□□ -0.31
ABCB1-207ENST00000488737 TNFRSF13CQ96RJ3 184 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms