RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TMIGD3P0DMS9 266 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 FCGR2AP12318 317 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ETS2P15036 469 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 COL8A1P27658 744 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 TPD52P55327 224 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 SESN3P58005 492 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 MERTKQ12866 999 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 SELENBP1Q13228 472 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 SCARB2Q14108 478 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 CYP51A1Q16850 503 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 TRMT5Q32P41 509 aaKnown RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF311Q5JNZ3 666 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 HBMQ6B0K9 141 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 GGNQ86UU5 652 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ATP6V1C2Q8NEY4 427 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 OR2V1Q8NHB1 315 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 RP9Q8TA86 221 aaKnown RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 LRRC46Q96FV0 321 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 KLHL15Q96M94 604 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF607Q96SK3 696 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 UCK2Q9BZX2 261 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 DNAJB12Q9NXW2 375 aaKnown RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 MCTS1Q9ULC4 181 aaKnown RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ANGPT4Q9Y264 503 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF443Q9Y2A4 671 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF175Q9Y473 711 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 SPIN1Q9Y657 262 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 CDHR4A6H8M9 788 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 NKX2-6A6NCS4 301 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 SERPINB7O75635 380 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 NTN1O95631 604 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 TGM6O95932 706 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 IL18BPO95998 194 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 PABPC4LP0CB38 370 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 DRD4P21917 467 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 BMP5P22003 454 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 SLC7A1P30825 629 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 SFTPDP35247 375 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 APOBEC1P41238 236 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 HTR3AP46098 478 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 IDH2P48735 452 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 CARD18P57730 90 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 MTPNP58546 118 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 RBBP4Q09028 425 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 CAPRIN1Q14444 709 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 PON3Q15166 354 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 TMEM176BQ3YBM2 270 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 REP15Q6BDI9 236 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 PPP4R4Q6NUP7 873 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 C3orf33Q6P1S2 294 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 PLEKHM3Q6ZWE6 761 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF550Q7Z398 422 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 GRINAQ7Z429 371 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 MTDHQ86UE4 582 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 LIX1LQ8IVB5 337 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 SLC30A8Q8IWU4 369 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 C11orf65Q8NCR3 313 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 NAXEQ8NCW5 288 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 HIPK4Q8NE63 616 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 OR10D3Q8NH80 312 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 INTS12Q96CB8 462 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 LRRC58Q96CX6 371 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 REXO5Q96IC2 774 aaKnown RBP13.54□□□□□ -0.24
CXCL12-207ENST00000488591 SFXN3Q9BWM7 321 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 HEATR5AQ86XA9 2040 aa13.54□□□□□ -0.24
CXCL12-207ENST00000488591 A0A0J9YW62 118 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 PRORSD1PA6NEY8 169 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 FAAHO00519 579 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 TNFSF11O14788 317 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 EFNA2O43921 213 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 SNX3O60493 162 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 BCAS1O75363 584 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-207ENST00000488591 CRHP06850 196 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 IL11P20809 199 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 FKBP2P26885 142 aaKnown RBP13.53□□□□□ -0.24
CXCL12-207ENST00000488591 GRNP28799 593 aaKnown RBP13.53□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF136P52737 540 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 COPZ1P61923 177 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 EPS8Q12929 822 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 HIST2H2BCQ6DN03 193 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 GTF2IRD2BQ6EKJ0 949 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 NANOGP8Q6NSW7 305 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 POMZP3Q6PJE2 187 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 PLXDC2Q6UX71 529 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 SERPINA11Q86U17 422 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 GTF2IRD2Q86UP8 949 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 BHLHE22Q8NFJ8 381 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-207ENST00000488591 OR8J3Q8NGG0 315 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 FNDC9Q8TBE3 224 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 SLC25A43Q8WUT9 341 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-207ENST00000488591 FIG4Q92562 907 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 OSTF1Q92882 214 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF845Q96IR2 970 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms