RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 DUSP22Q9NRW4 184 aa13.46□□□□□ -0.25
MCF2L-228ENST00000487354 ACSS1Q9NUB1 689 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-228ENST00000487354 MALT1Q9UDY8 824 aa13.46□□□□□ -0.25
MCF2L-228ENST00000487354 POU2F3Q9UKI9 436 aa13.46□□□□□ -0.25
MCF2L-228ENST00000487354 TRAF6Q9Y4K3 522 aa13.46□□□□□ -0.25
MCF2L-228ENST00000487354 G3V2L1 256 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 M0R1B8 84 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 AKAP10O43572 662 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 HSPA4LO95757 839 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 NUDT14O95848 222 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 SLC7A1P30825 629 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 CHRNEQ04844 493 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 LASP1Q14847 261 aaKnown RBP13.45□□□□□ -0.26
MCF2L-228ENST00000487354 QPRTQ15274 297 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 LRIG3Q6UXM1 1119 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 FRMD7Q6ZUT3 714 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 ZNF100Q8IYN0 542 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 CLHC1Q8NHS4 586 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 ZFP28Q8NHY6 868 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 JADE3Q92613 823 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 PPCDCQ96CD2 204 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 MUS81Q96NY9 551 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 OR5B2Q96R09 309 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 CCT7Q99832 543 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 PIGUQ9H490 435 aa13.45□□□□□ -0.26
MCF2L-228ENST00000487354 MGAM2Q2M2H8 2515 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 DIO1P49895 249 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 PDK3Q15120 406 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 TIGD2Q4W5G0 525 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 DCST2Q5T1A1 773 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 CDC73Q6P1J9 531 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 C3orf33Q6P1S2 294 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 KLHL17Q6TDP4 642 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 LCA5Q86VQ0 697 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 OR5W2Q8NH69 310 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 METTL2AQ96IZ6 378 aaKnown RBP13.44□□□□□ -0.26
MCF2L-228ENST00000487354 TSSK3Q96PN8 268 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 C1QTNF6Q9BXI9 259 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 GPATCH2Q9NW75 528 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 BAIAP2L1Q9UHR4 511 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 KCNE5Q9UJ90 142 aa13.44□□□□□ -0.26
MCF2L-228ENST00000487354 ATP6V1G2-DDX39BF2Z307 99 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 NDUFS8O00217 210 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 SEC22BO75396 215 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 APEHP13798 732 aaKnown RBP13.43□□□□□ -0.26
MCF2L-228ENST00000487354 ITGA2P17301 1181 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 CFPP27918 469 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 PDLIM4P50479 330 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 ATP12AP54707 1039 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 SKP2Q13309 424 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 MLC1Q15049 377 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 CR1LQ2VPA4 569 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 CLEC6AQ6EIG7 209 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 C8orf74Q6P047 294 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 TMPPEQ6ZT21 453 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 CCNYL1Q8N7R7 359 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-228ENST00000487354 ZNF527Q8NB42 609 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 OR52E4Q8NGH9 312 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 MZB1Q8WU39 189 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 TUBB1Q9H4B7 451 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 RRAGDQ9NQL2 400 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-228ENST00000487354 ZCCHC3Q9NUD5 404 aaKnown RBP13.43□□□□□ -0.26
MCF2L-228ENST00000487354 C1orf109Q9NX04 203 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 TAS2R16Q9NYV7 291 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 SH3BP4Q9P0V3 963 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 DTNAQ9Y4J8 743 aa13.43□□□□□ -0.26
MCF2L-228ENST00000487354 APOBEC3AP31941 199 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-228ENST00000487354 SLC16A1P53985 500 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 PHC1P78364 1004 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 SQLEQ14534 574 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 RFTN2Q52LD8 501 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-228ENST00000487354 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 RFWD2Q8NHY2 731 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 PSMA8Q8TAA3 256 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 APH1AQ96BI3 265 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 C3orf49Q96BT1 292 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 FOXN4Q96NZ1 517 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 PIMREGQ9BSJ6 248 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 ADAM19Q9H013 955 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 ASB6Q9NWX5 421 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 ATP23Q9Y6H3 246 aa13.42□□□□□ -0.26
MCF2L-228ENST00000487354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
MCF2L-228ENST00000487354 A0A087WUV0 522 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-228ENST00000487354 CIB4A0PJX0 185 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 CCT8L1PA6NM43 557 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ZNF264O43296 627 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 KCNAB3O43448 404 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 EIF4E2O60573 245 aaKnown RBP13.41□□□□□ -0.26
MCF2L-228ENST00000487354 BCAS1O75363 584 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-228ENST00000487354 TGFAP01135 160 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 UBL4AP11441 157 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ZNF23P17027 643 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 HNF1AP20823 631 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 IL2RGP31785 369 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 SESN3P58005 492 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 CBFBQ13951 182 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms