RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RASSF6Q6ZTQ3 369 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PTCHD4Q6ZW05 846 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 GPR141Q7Z602 305 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 NRMQ8IXM6 262 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 SLC34A3Q8N130 599 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 B3GNT7Q8NFL0 401 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 UBE2FQ969M7 185 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 DGCR14Q96DF8 476 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 MPP4Q96JB8 637 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 HS6ST2Q96MM7 605 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 SPSB2Q99619 263 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TUBA1CQ9BQE3 449 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 SEMA4CQ9C0C4 833 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 ZNF226Q9NYT6 803 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PPIEQ9UNP9 301 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 CACNA1GO43497 2377 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 A0A0B4J2E0 115 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 A0A1B0GX12 115 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 SH3D21A4FU49 640 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 REM1O75628 298 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 LYPD3O95274 346 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 UTS2O95399 124 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 RAB40ALP0C0E4 278 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 JUNBP17275 347 aaPredicted RBP13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 TBXA2RP21731 343 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 PNLIPRP2P54317 469 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 LY6DQ14210 128 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 ZBED5Q49AG3 693 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 ATP1A1-AS1Q5TC04 95 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 TMEM205Q6UW68 189 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 SPARTQ8N0X7 666 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 ZNF441Q8N8Z8 693 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 ZNF540Q8NDQ6 660 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 NFAM1Q8NET5 270 aaPredicted RBP13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 TEX47Q8TBZ9 253 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 TMEM239Q8WW34 195 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 FAM46AQ96IP4 442 aaKnown RBP13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 LMF1Q96S06 567 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 LPAR4Q99677 370 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 GPA33Q99795 319 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 CRB3Q9BUF7 120 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 PAK1IP1Q9NWT1 392 aaPredicted RBP13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 RPS6KB2Q9UBS0 482 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 AASSQ9UDR5 926 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 TMEM5Q9Y2B1 443 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 PCDHGB1Q9Y5G3 927 aa13.38□□□□□ -0.27
POLR2J3-204ENST00000486319 A0A1B0GWA3 101 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 C9J4A7 227 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 RBM34P42696 430 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 GIPRP48546 466 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 SMSP52788 366 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 COPZ1P61923 177 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 RPS18P62269 152 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 SNRPGP62308 76 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 RNF4P78317 190 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 CDK5Q00535 292 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 PLCXD2Q0VAA5 305 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 SMN1Q16637 294 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 DEFB109BQ30KR1 87 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 FNDC7Q5VTL7 733 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 ULK3Q6PHR2 472 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 CPEB2Q7Z5Q1 589 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 CDK20Q8IZL9 346 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 CLDN22Q8N7P3 220 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 FAM71CQ8NEG0 241 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 OR8J1Q8NGP2 316 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 RNF217Q8TC41 542 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 Q96MT0 163 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 ADOQ96SZ5 270 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 PRRG3Q9BZD7 231 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 RBM38Q9H0Z9 239 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 SLC25A19Q9HC21 320 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 EXOSC3Q9NQT5 275 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 SELENONQ9NZV5 590 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 CNIH4Q9P003 139 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 MED31Q9Y3C7 131 aa13.37□□□□□ -0.27
POLR2J3-204ENST00000486319 IGHV3-20A0A0C4DH32 117 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 CDC14CA4D256 554 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 CCDC160A6NGH7 325 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 KLF4O43474 513 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 RGS10O43665 173 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 PRKNO60260 465 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 TSPAN2O60636 221 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 CNOT3O75175 753 aaKnown RBP13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 OR6B1O95007 311 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 NGFRP08138 427 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 IGFBP1P08833 259 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 HTR1AP08908 422 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 FAM87AP0C7U9 286 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 UBL4AP11441 157 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 NRG3P56975 720 aa13.36□□□□□ -0.27
POLR2J3-204ENST00000486319 FOXL2P58012 376 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms