RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SPACA6W5XKT8 324 aa1.98□□□□□ -2.09
GCFC2-209ENST00000486016 TRBV6-6A0A0A6YYG2 114 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 PPIAL4CA0A0B4J2A2 164 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 ABCD4O14678 606 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 NEBLO76041 1014 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 B3GAT3O94766 335 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 UFL1O94874 794 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 MFN2O95140 757 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 PCCBP05166 539 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 HBQ1P09105 142 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 PPIAL4GP0DN37 164 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 PDHBP11177 359 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 DRD5P21918 477 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 PSMA2P25787 234 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 VLDLRP98155 873 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 CNTN2Q02246 1040 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 PAX5Q02548 391 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 ST3GAL3Q11203 375 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 TMEM17Q86X19 198 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 LINC01561Q8N1V8 128 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 TRUB1Q8WWH5 349 aaKnown RBP1.97□□□□□ -2.09
GCFC2-209ENST00000486016 OSTF1Q92882 214 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 RAB7BQ96AH8 199 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 CNPY3Q9BT09 278 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 MEAF6Q9HAF1 191 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.97□□□□□ -2.09
GCFC2-209ENST00000486016 MARCH5Q9NX47 278 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 CGNQ9P2M7 1197 aaKnown RBP1.97□□□□□ -2.09
GCFC2-209ENST00000486016 XPO7Q9UIA9 1087 aaKnown RBP1.97□□□□□ -2.09
GCFC2-209ENST00000486016 BLOC1S6Q9UL45 172 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 GSTK1Q9Y2Q3 226 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 USP16Q9Y5T5 823 aa1.97□□□□□ -2.09
GCFC2-209ENST00000486016 OR6C65A6NJZ3 312 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 PPIAL4DF5H284 164 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 K7ENP7 123 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 NDC80O14777 642 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 ANGPT2O15123 496 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 OR1F1O43749 312 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 IDH1O75874 414 aaKnown RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 TM7SF2O76062 418 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 SUPT7LO94864 414 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 F10P00742 488 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 KRT8P05787 483 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 CLUP10909 449 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 TPSB2P20231 275 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 NT5EP21589 574 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 TBXA2RP21731 343 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 SOX6P35712 828 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 STARP49675 285 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 OC90Q02509 493 aaPredicted RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 PJVKQ0ZLH3 352 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 SNTB2Q13425 540 aaKnown RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 MOBPQ13875 183 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 TPSAB1Q15661 275 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 SLC36A3Q495N2 470 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 METTL11BQ5VVY1 283 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 SLC25A24Q6NUK1 477 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 ACSM5Q6NUN0 579 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 KIAA1328Q86T90 577 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 ZDHHC21Q8IVQ6 265 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 OR2T34Q8NGX1 318 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 NEIL3Q8TAT5 605 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 IL1F10Q8WWZ1 152 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 THRSPQ92748 146 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 PSMG2Q969U7 264 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 MYLPFQ96A32 169 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 HAVCR1Q96D42 359 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 VPS39Q96JC1 886 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 NOL4LQ96MY1 436 aaPredicted RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 DUSP16Q9BY84 665 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 RAB33BQ9H082 229 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 RIBC2Q9H4K1 309 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 CAB39LQ9H9S4 337 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 FARSBQ9NSD9 589 aaKnown RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 PAK1IP1Q9NWT1 392 aaPredicted RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 ZNF223Q9UK11 482 aaPredicted RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 SAMD4AQ9UPU9 718 aaKnown RBP1.96□□□□□ -2.1
GCFC2-209ENST00000486016 ATP10DQ9P241 1426 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 ANKRD30BQ9BXX2 1392 aa1.96□□□□□ -2.1
GCFC2-209ENST00000486016 GSAPA4D1B5 854 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 FAM166BA8MTA8 275 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 A8MUI8 341 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 H3BMQ9 156 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 XPO1O14980 1071 aaKnown RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 ZSCAN12O43309 604 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 BBOX1O75936 387 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 CABYRO75952 493 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 ATP6V1C1P21283 382 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 PAX7P23759 505 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 ADORA2BP29275 332 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 CA8P35219 290 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 RPL29P47914 159 aaKnown RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 DHPSP49366 369 aaPredicted RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 PLA2G16P53816 162 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 HSD17B7P56937 341 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 EWSR1Q01844 656 aaKnown RBP eCLIP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 RIPPLY1Q0D2K3 151 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 LAGE3Q14657 143 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 NDUFA9Q16795 377 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 SLC5A12Q1EHB4 618 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms