RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CCR4P51679 360 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 CTU2Q2VPK5 515 aaKnown RBP16■□□□□ 0.15
SREBF1-213ENST00000485080 SLC25A35Q3KQZ1 300 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 RPS26P11Q5JNZ5 115 aaPredicted RBP16■□□□□ 0.15
SREBF1-213ENST00000485080 EEF1A1P5Q5VTE0 462 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 POMZP3Q6PJE2 187 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 CHMP1BQ7LBR1 199 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 PTOV1Q86YD1 416 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 CCDC71Q8IV32 467 aaPredicted RBP16■□□□□ 0.15
SREBF1-213ENST00000485080 SLC30A8Q8IWU4 369 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 LILRA2Q8N149 483 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 C11orf65Q8NCR3 313 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 HIPK4Q8NE63 616 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 TNIP2Q8NFZ5 429 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 OR10Q1Q8NGQ4 319 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 ARMC7Q9H6L4 198 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 CACYBPQ9HB71 228 aaKnown RBP16■□□□□ 0.15
SREBF1-213ENST00000485080 CHST11Q9NPF2 352 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 GID8Q9NWU2 228 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF443Q9Y2A4 671 aaPredicted RBP16■□□□□ 0.15
SREBF1-213ENST00000485080 CHST2Q9Y4C5 530 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 NOTCH2Q04721 2471 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 KIAA1549Q9HCM3 1950 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 A1L4Q6 167 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 CFAP73A6NFT4 308 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 GJE1A6NN92 205 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 H0YC42 278 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 ADAM11O75078 769 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 CYP7B1O75881 506 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 CRHP06850 196 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 PABPC4LP0CB38 370 aaKnown RBP15.99■□□□□ 0.15
SREBF1-213ENST00000485080 FKBP2P26885 142 aaKnown RBP15.99■□□□□ 0.15
SREBF1-213ENST00000485080 PRKAR1BP31321 381 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 GZMMP51124 257 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 TPD52P55327 224 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-213ENST00000485080 PCBP3P57721 371 aaKnown RBP15.99■□□□□ 0.15
SREBF1-213ENST00000485080 MTPNP58546 118 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 EPS8Q12929 822 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 SELENBP1Q13228 472 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 SCARB2Q14108 478 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 SELPLGQ14242 412 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF836Q6ZNA1 936 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 GRINAQ7Z429 371 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 HMGN2P46Q86SG4 172 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 VRK2Q86Y07 508 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 KRT73Q86Y46 540 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 UBQLNLQ8IYU4 475 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 C9orf106Q8NAJ2 232 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 ACBD4Q8NC06 268 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 NAXEQ8NCW5 288 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 NFKBIDQ8NI38 313 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 KLHL15Q96M94 604 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 SPATA5L1Q9BVQ7 753 aa15.99■□□□□ 0.15
SREBF1-213ENST00000485080 SEC14L5O43304 696 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 TGM6O95932 706 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 COX4I1P13073 169 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 UQCRBP14927 111 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 IL11P20809 199 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 CTSSP25774 331 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 HTR1EP28566 365 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 APOBEC1P41238 236 aaKnown RBP15.98■□□□□ 0.15
SREBF1-213ENST00000485080 HTR3AP46098 478 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 MAP2K6P52564 334 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF136P52737 540 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 TFF3Q07654 80 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 CAPRIN1Q14444 709 aaKnown RBP15.98■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF311Q5JNZ3 666 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 OR2A2Q6IF42 318 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 DHRS4L2Q6PKH6 230 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 PLEKHM3Q6ZWE6 761 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF550Q7Z398 422 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 CALHM3Q86XJ0 350 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 TREML1Q86YW5 311 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 CLIP4Q8N3C7 705 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 BHLHE22Q8NFJ8 381 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-213ENST00000485080 OR2V1Q8NHB1 315 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF607Q96SK3 696 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 FAM107BQ9H098 131 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 RLIMQ9NVW2 624 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 AP3M1Q9Y2T2 418 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 ITPR2Q14571 2701 aa15.98■□□□□ 0.15
SREBF1-213ENST00000485080 A0A0J9YW62 118 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SLC22A20A6NK97 555 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 DVL2O14641 736 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SERPINB7O75635 380 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 FCGR2AP12318 317 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 PRDX6P30041 224 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 PCGF2P35227 344 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 OPRM1P35372 400 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 ACAA2P42765 397 aaKnown RBP15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SLC1A3P43003 542 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 CLK1P49759 484 aaKnown RBP15.97■□□□□ 0.15
SREBF1-213ENST00000485080 CYP51A1Q16850 503 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 FBXL19-AS1Q494R0 122 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 PDSS1Q5T2R2 415 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 C3orf33Q6P1S2 294 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 HACD2Q6Y1H2 254 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 LIX1LQ8IVB5 337 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 ZZZ3Q8IYH5 903 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 ANKS4BQ8N8V4 417 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms