RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 CLIC1O00299 241 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 EFNA2O43921 213 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 PLGP00747 810 aaPredicted RBP16.02■□□□□ 0.16
RNF38-207ENST00000484621 BCHEP06276 602 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 IL7RP16871 459 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 SHC1P29353 583 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 RYKP34925 604 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 PGM1P36871 562 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 SLC6A8P48029 635 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 MVDP53602 400 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 CARD18P57730 90 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 SELENBP1Q13228 472 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 GNA13Q14344 377 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 TMEM176BQ3YBM2 270 aaPredicted RBP16.02■□□□□ 0.16
RNF38-207ENST00000484621 VWA1Q6PCB0 445 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 PEX5LQ8IYB4 626 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 ZZZ3Q8IYH5 903 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 ZNF563Q8TA94 476 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 STON2Q8WXE9 905 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 ST8SIA1Q92185 356 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 ZNF524Q96C55 264 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 TMUB1Q9BVT8 246 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 RAD21L1Q9H4I0 556 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 GSX1Q9H4S2 264 aaPredicted RBP16.02■□□□□ 0.16
RNF38-207ENST00000484621 RABEP2Q9H5N1 569 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 TIGARQ9NQ88 270 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 THUMPD1Q9NXG2 353 aaKnown RBP16.02■□□□□ 0.16
RNF38-207ENST00000484621 TRIM33Q9UPN9 1127 aa16.02■□□□□ 0.16
RNF38-207ENST00000484621 AGAP5A6NIR3 686 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 CLDN24A6NM45 220 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 BCAS1O75363 584 aaPredicted RBP16.01■□□□□ 0.15
RNF38-207ENST00000484621 CAPN3P20807 821 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 SLC7A1P30825 629 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 CPOXP36551 454 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 KIR2DL2P43627 348 aaPredicted RBP16.01■□□□□ 0.15
RNF38-207ENST00000484621 CRISP3P54108 245 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 SESN3P58005 492 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 MERTKQ12866 999 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 SLC25A53Q5H9E4 307 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 BTLAQ7Z6A9 289 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 TMEM200AQ86VY9 491 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 CMIPQ8IY22 773 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 FAM71CQ8NEG0 241 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 WDR60Q8WVS4 1066 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 STARD4Q96DR4 205 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 REXO5Q96IC2 774 aaKnown RBP16.01■□□□□ 0.15
RNF38-207ENST00000484621 SIKE1Q9BRV8 207 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 CACYBPQ9HB71 228 aaKnown RBP16.01■□□□□ 0.15
RNF38-207ENST00000484621 SERINC1Q9NRX5 453 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 TMEM45AQ9NWC5 275 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 GALNT8Q9NY28 637 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 CRIM1Q9NZV1 1036 aa16.01■□□□□ 0.15
RNF38-207ENST00000484621 TUBAL3A6NHL2 446 aa16■□□□□ 0.15
RNF38-207ENST00000484621 MSTNO14793 375 aa16■□□□□ 0.15
RNF38-207ENST00000484621 DNAJA2O60884 412 aa16■□□□□ 0.15
RNF38-207ENST00000484621 NTN1O95631 604 aa16■□□□□ 0.15
RNF38-207ENST00000484621 DBIP07108 87 aaKnown RBP16■□□□□ 0.15
RNF38-207ENST00000484621 RPS4Y1P22090 263 aaKnown RBP16■□□□□ 0.15
RNF38-207ENST00000484621 ART1P52961 327 aa16■□□□□ 0.15
RNF38-207ENST00000484621 CTBP2P56545 445 aa16■□□□□ 0.15
RNF38-207ENST00000484621 RGNQ15493 299 aa16■□□□□ 0.15
RNF38-207ENST00000484621 C3orf33Q6P1S2 294 aa16■□□□□ 0.15
RNF38-207ENST00000484621 SLC38A5Q8WUX1 472 aa16■□□□□ 0.15
RNF38-207ENST00000484621 CNOT9Q92600 299 aaKnown RBP16■□□□□ 0.15
RNF38-207ENST00000484621 PMM1Q92871 262 aa16■□□□□ 0.15
RNF38-207ENST00000484621 CPNE4Q96A23 557 aaPredicted RBP16■□□□□ 0.15
RNF38-207ENST00000484621 EXOSC3Q9NQT5 275 aaKnown RBP16■□□□□ 0.15
RNF38-207ENST00000484621 ACER3Q9NUN7 267 aa16■□□□□ 0.15
RNF38-207ENST00000484621 CLEC4AQ9UMR7 237 aa16■□□□□ 0.15
RNF38-207ENST00000484621 EMC9Q9Y3B6 208 aa16■□□□□ 0.15
RNF38-207ENST00000484621 ABCA2Q9BZC7 2435 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 NIPBLQ6KC79 2804 aaeCLIP15.99■□□□□ 0.15
RNF38-207ENST00000484621 A8MXE2 369 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 ETV2O00321 342 aaPredicted RBP15.99■□□□□ 0.15
RNF38-207ENST00000484621 TROVE2P10155 538 aaKnown RBP eCLIP15.99■□□□□ 0.15
RNF38-207ENST00000484621 NID1P14543 1247 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 SORDQ00796 357 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 FADDQ13158 208 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 MAPK11Q15759 364 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 PAGE3Q5JUK9 113 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 LRIF1Q5T3J3 769 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 MRPL2Q5T653 305 aaKnown RBP15.99■□□□□ 0.15
RNF38-207ENST00000484621 GTF2IRD2BQ6EKJ0 949 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 PLEKHM3Q6ZWE6 761 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 FAM214BQ7L5A3 538 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 GTF2IRD2Q86UP8 949 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 OR52P1PQ8NH57 321 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 FAM222BQ8WU58 562 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 ROBO4Q8WZ75 1007 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 TMEM19Q96HH6 336 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 OPN3Q9H1Y3 402 aaPredicted RBP15.99■□□□□ 0.15
RNF38-207ENST00000484621 SLC52A3Q9NQ40 469 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 DNAJB12Q9NXW2 375 aaKnown RBP15.99■□□□□ 0.15
RNF38-207ENST00000484621 SLAMF8Q9P0V8 285 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 PROCRQ9UNN8 238 aa15.99■□□□□ 0.15
RNF38-207ENST00000484621 PRRC2AP48634 2157 aaKnown RBP15.99■□□□□ 0.15
RNF38-207ENST00000484621 A0A1W2PNR3 127 aa15.98■□□□□ 0.15
RNF38-207ENST00000484621 A0A1W2PP18 115 aa15.98■□□□□ 0.15
RNF38-207ENST00000484621 VIMP08670 466 aaKnown RBP15.98■□□□□ 0.15
RNF38-207ENST00000484621 TFPTP0C1Z6 253 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms