RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ZDHHC18Q9NUE0 388 aa3.82□□□□□ -1.8
PTCD3-214ENST00000483925 TXLNGQ9NUQ3 528 aa3.82□□□□□ -1.8
PTCD3-214ENST00000483925 INTS9Q9NV88 658 aaKnown RBP3.82□□□□□ -1.8
PTCD3-214ENST00000483925 OCIAD1Q9NX40 245 aa3.82□□□□□ -1.8
PTCD3-214ENST00000483925 SIGLEC8Q9NYZ4 499 aa3.82□□□□□ -1.8
PTCD3-214ENST00000483925 PHF11Q9UIL8 331 aa3.82□□□□□ -1.8
PTCD3-214ENST00000483925 GAB2Q9UQC2 676 aa3.82□□□□□ -1.8
PTCD3-214ENST00000483925 AK6Q9Y3D8 172 aaKnown RBP3.82□□□□□ -1.8
PTCD3-214ENST00000483925 TRBV7-9A0A0J9YWB2 115 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 A0A1W2PPV9 198 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 RAB19A4D1S5 217 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 TRAFD1O14545 582 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF195O14628 629 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 AIM2O14862 343 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 INPP4BO15327 924 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 EIF3HO15372 352 aaKnown RBP eCLIP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PSTPIP1O43586 416 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 EFNA2O43921 213 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PRKNO60260 465 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 RAMP1O60894 148 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 HUS1O60921 280 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 UGT2B17O75795 530 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 CDK14O94921 469 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SEC24AO95486 1093 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 OAS1P00973 400 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 JCHAINP01591 159 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 GAPDHP04406 335 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 RPLP0P05388 317 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SERPINE2P07093 398 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 HOXB7P09629 217 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 CCL2P13500 99 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 EDNRAP25101 427 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 CALML3P27482 149 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 LCN1P31025 176 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 MRPL19P49406 292 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PSMD4P55036 377 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PSMC5P62195 406 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 UBE2IP63279 158 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 RAB40BQ12829 278 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 FASTKD3Q14CZ7 662 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 TAB1Q15750 504 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF77Q15935 545 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 DMRTC1Q5HYR2 192 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SPECC1LQ69YQ0 1117 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 C22orf42Q6IC83 251 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 OR8G2PQ6IF36 304 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 OR52W1Q6IF63 320 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 NEPROQ6NW34 567 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SLC25A47Q6Q0C1 308 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SASS6Q6UVJ0 657 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 C19orf35Q6ZS72 473 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 MOB2Q70IA6 237 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 COPS6Q7L5N1 327 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SLC16A14Q7RTX9 510 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 MRPL21Q7Z2W9 205 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 RBM45Q8IUH3 476 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 CCDC65Q8IXS2 484 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 METTL27Q8N6F8 245 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF441Q8N8Z8 693 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 FBXL13Q8NEE6 735 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 B3GNT7Q8NFL0 401 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 OR51L1Q8NGJ5 315 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 OR1B1Q8NGR6 318 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SMAP2Q8WU79 429 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 HPSE2Q8WWQ2 592 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 FCAMRQ8WWV6 532 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 IL1F10Q8WWZ1 152 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PLEKHA8Q96JA3 519 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 C2orf48Q96LS8 159 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 FOXN4Q96NZ1 517 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SLC29A1Q99808 456 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 HDHD2Q9H0R4 259 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PPA2Q9H2U2 334 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 CSNK1G1Q9HCP0 422 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 INPP5EQ9NRR6 644 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 ADAM22Q9P0K1 906 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 KLK11Q9UBX7 282 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 MTRF1LQ9UGC7 380 aaKnown RBP3.81□□□□□ -1.8
PTCD3-214ENST00000483925 SCML2Q9UQR0 700 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 TCF19Q9Y242 345 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 PPP2R2CQ9Y2T4 447 aa3.81□□□□□ -1.8
PTCD3-214ENST00000483925 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 IGHV4OR15-8A0A075B7B6 117 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 PLSCR5A0PG75 271 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RSPH10B2B2RC85 870 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 K7ERI5 159 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RGS16O15492 202 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-214ENST00000483925 DUSP11O75319 330 aaKnown RBP3.8□□□□□ -1.8
PTCD3-214ENST00000483925 IGHG4P01861 327 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 MMP1P03956 469 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 ALDOBP05062 364 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RSPH10BP0C881 870 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RNH1P13489 461 aaKnown RBP3.8□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF43P17038 809 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 SOX3P41225 446 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 MAP3K8P41279 467 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CX3CR1P49238 355 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 HMGCS2P54868 508 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 GUCY2DQ02846 1103 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms