RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 INPP5KQ9BT40 448 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 SH3BP4Q9P0V3 963 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 MGAT4BQ9UQ53 548 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 GJE1A6NN92 205 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 KIF2AO00139 706 aaPredicted RBP11.28□□□□□ -0.6
UBR4-213ENST00000483922 PGRP06401 933 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 PYGBP11216 843 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 DIO1P49895 249 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 SELENBP1Q13228 472 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 TIGD2Q4W5G0 525 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 CLEC6AQ6EIG7 209 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 ABLIM2Q6H8Q1 611 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 CDC73Q6P1J9 531 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 TMPPEQ6ZT21 453 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 C17orf53Q8N3J3 647 aaPredicted RBP11.28□□□□□ -0.6
UBR4-213ENST00000483922 ZNF527Q8NB42 609 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 OR52E4Q8NGH9 312 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 PPCDCQ96CD2 204 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 DNAJA3Q96EY1 480 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 TSSK3Q96PN8 268 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 STACQ99469 402 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
UBR4-213ENST00000483922 HHATLQ9HCP6 504 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 DUSP22Q9NRW4 184 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 ACSS1Q9NUB1 689 aaPredicted RBP11.28□□□□□ -0.6
UBR4-213ENST00000483922 GPATCH2Q9NW75 528 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 POU2F3Q9UKI9 436 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 KCNS2Q9ULS6 477 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 STK38LQ9Y2H1 464 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 DTNAQ9Y4J8 743 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
UBR4-213ENST00000483922 ARFGEF3Q5TH69 2177 aa11.27□□□□□ -0.6
UBR4-213ENST00000483922 CCDC151A5D8V7 595 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 KCNAB3O43448 404 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.61
UBR4-213ENST00000483922 TGFAP01135 160 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 SLC7A1P30825 629 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 IL2RGP31785 369 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.61
UBR4-213ENST00000483922 ATP12AP54707 1039 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 SUMO3P55854 103 aaPredicted RBP11.27□□□□□ -0.61
UBR4-213ENST00000483922 SESN3P58005 492 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 CR1LQ2VPA4 569 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 DCST2Q5T1A1 773 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 FRMD7Q6ZUT3 714 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 CCDC103Q8IW40 242 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 ANKS4BQ8N8V4 417 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 OR5W2Q8NH69 310 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 JADE3Q92613 823 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 C3orf49Q96BT1 292 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 ARL5BQ96KC2 179 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 THUMPD3Q9BV44 507 aaKnown RBP11.27□□□□□ -0.61
UBR4-213ENST00000483922 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.61
UBR4-213ENST00000483922 C1orf109Q9NX04 203 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 ATP23Q9Y6H3 246 aa11.27□□□□□ -0.61
UBR4-213ENST00000483922 A0A1W2PPM1 405 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 CIB4A0PJX0 185 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 LRP5LA4QPB2 252 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 CCT8L1PA6NM43 557 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 GTPBP1O00178 669 aaKnown RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 ZNF264O43296 627 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 FCMRO60667 390 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 SLU7O95391 586 aaKnown RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 HSPA4LO95757 839 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 ITGA2P17301 1181 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 CFPP27918 469 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 SKP2Q13309 424 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 MLC1Q15049 377 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 PDK3Q15120 406 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 C9orf135Q5VTT2 229 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 MTDHQ86UE4 582 aaKnown RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 MEX3DQ86XN8 651 aaKnown RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 UBE2J2Q8N2K1 259 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 OR7A2PQ8NGA2 310 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 ZFP28Q8NHY6 868 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 FBXO17Q96EF6 278 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 METTL2AQ96IZ6 378 aaKnown RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 SDF2Q99470 211 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 HOXD1Q9GZZ0 328 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 SERHL2Q9H4I8 314 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 ZCCHC3Q9NUD5 404 aaKnown RBP11.26□□□□□ -0.61
UBR4-213ENST00000483922 ASB6Q9NWX5 421 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 MALT1Q9UDY8 824 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 GIMAP2Q9UG22 337 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 TRRAPQ9Y4A5 3859 aa11.26□□□□□ -0.61
UBR4-213ENST00000483922 A0A087WUV0 522 aaPredicted RBP11.25□□□□□ -0.61
UBR4-213ENST00000483922 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 EIF4E2O60573 245 aaKnown RBP11.25□□□□□ -0.61
UBR4-213ENST00000483922 UROSP10746 265 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 LAMP1P11279 417 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 BCKDHAP12694 445 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 APEHP13798 732 aaKnown RBP11.25□□□□□ -0.61
UBR4-213ENST00000483922 CASQ1P31415 396 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 PDLIM4P50479 330 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms