RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ZSWIM7Q19AV6 140 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 RPS26P11Q5JNZ5 115 aaPredicted RBP16.52■□□□□ 0.24
SMIM4-204ENST00000482728 MRPL2Q5T653 305 aaKnown RBP16.52■□□□□ 0.24
SMIM4-204ENST00000482728 PRAMEF8Q5VWM4 474 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 PRAMEF7Q5VXH5 474 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 OSTF1Q92882 214 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 REXO5Q96IC2 774 aaKnown RBP16.52■□□□□ 0.24
SMIM4-204ENST00000482728 ENKD1Q9H0I2 346 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 BCL2L10Q9HD36 194 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 NPDC1Q9NQX5 325 aaPredicted RBP16.52■□□□□ 0.24
SMIM4-204ENST00000482728 SAR1AQ9NR31 198 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 IFT52Q9Y366 437 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 GMEB1Q9Y692 573 aa16.52■□□□□ 0.24
SMIM4-204ENST00000482728 CELSR2Q9HCU4 2923 aa16.52■□□□□ 0.23
SMIM4-204ENST00000482728 HCFC1P51610 2035 aa16.52■□□□□ 0.23
SMIM4-204ENST00000482728 TRBV5-3A0A0A0MS03 114 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 EEF1E1-BLOC1S5C9J1V9 151 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 SYT5O00445 386 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 EEF1E1O43324 174 aaKnown RBP16.51■□□□□ 0.23
SMIM4-204ENST00000482728 BCAS1O75363 584 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-204ENST00000482728 NTN1O95631 604 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 GPX2P18283 190 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 SLC7A1P30825 629 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 UQCRC1P31930 480 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 KLF10Q13118 480 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 SELENBP1Q13228 472 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 MAPRE2Q15555 327 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 MMEL1Q495T6 779 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 LIN52Q52LA3 116 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 RUNDC3AQ59EK9 446 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 POMZP3Q6PJE2 187 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 RETREG3Q86VR2 466 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 VRK2Q86Y07 508 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 ZNF440Q8IYI8 595 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 CNEP1R1Q8N9A8 125 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 RELL2Q8NC24 303 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-204ENST00000482728 BBS10Q8TAM1 723 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 ZNF524Q96C55 264 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 CGREF1Q99674 301 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 DNAJB12Q9NXW2 375 aaKnown RBP16.51■□□□□ 0.23
SMIM4-204ENST00000482728 MAST4O15021 2626 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 ITPR2Q14571 2701 aa16.51■□□□□ 0.23
SMIM4-204ENST00000482728 DSPPQ9NZW4 1301 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 CFAP73A6NFT4 308 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ETV2O00321 342 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 DYNC1I1O14576 645 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 PGM3O95394 542 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 THBS1P07996 1170 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 SLC6A2P23975 617 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ADSLP30566 484 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 APOBEC1P41238 236 aaKnown RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 IDH2P48735 452 aaKnown RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 CDK6Q00534 326 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 CYLC2Q14093 348 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 CTU2Q2VPK5 515 aaKnown RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ZNF311Q5JNZ3 666 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 REEP3Q6NUK4 255 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 PLEKHM3Q6ZWE6 761 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 KRT73Q86Y46 540 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 MCEMP1Q8IX19 187 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 NFKBIDQ8NI38 313 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 RNASE6Q93091 150 aaKnown RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ADGRG7Q96K78 797 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ANKRD27Q96NW4 1050 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 PIGMQ9H3S5 423 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 IKZF5Q9H5V7 419 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 SLC24A3Q9HC58 644 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 RLIMQ9NVW2 624 aa16.5■□□□□ 0.23
SMIM4-204ENST00000482728 FOXD3Q9UJU5 478 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ZNF443Q9Y2A4 671 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 SPIN1Q9Y657 262 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-204ENST00000482728 ABCA12Q86UK0 2595 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 A0A1W2PNV4 684 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 CDHR4A6H8M9 788 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 CYSRT1A8MQ03 144 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 AQP8O94778 261 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 PLGP00747 810 aaPredicted RBP16.49■□□□□ 0.23
SMIM4-204ENST00000482728 PABPC4LP0CB38 370 aaKnown RBP16.49■□□□□ 0.23
SMIM4-204ENST00000482728 ARAFP10398 606 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 ETS2P15036 469 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 SHC1P29353 583 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 HTR3AP46098 478 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 CYP51A1Q16850 503 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 GTF2IRD2BQ6EKJ0 949 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 C3orf33Q6P1S2 294 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 ZNF836Q6ZNA1 936 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 GRINAQ7Z429 371 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 GTF2IRD2Q86UP8 949 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 CPPED1Q9BRF8 314 aaPredicted RBP16.49■□□□□ 0.23
SMIM4-204ENST00000482728 SPATA9Q9BWV2 254 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 TMEM38AQ9H6F2 299 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 RNF122Q9H9V4 155 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 PACSIN3Q9UKS6 424 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 CAPN7Q9Y6W3 813 aa16.49■□□□□ 0.23
SMIM4-204ENST00000482728 LOC100653049A0A140TA62 436 aa16.48■□□□□ 0.23
SMIM4-204ENST00000482728 AP3D1O14617 1153 aa16.48■□□□□ 0.23
SMIM4-204ENST00000482728 CCDC22O60826 627 aa16.48■□□□□ 0.23
SMIM4-204ENST00000482728 SMNDC1O75940 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMIM4-204ENST00000482728 KRT34O76011 436 aa16.48■□□□□ 0.23
SMIM4-204ENST00000482728 TFPIP10646 304 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms