RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 NCDNQ9UBB6 729 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 POM121CA8CG34 1229 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 POLR1CO15160 346 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 PAHP00439 452 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 DDOSTP39656 456 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ESCO2Q56NI9 601 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ATOH1Q92858 354 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 LPAR4Q99677 370 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 TMEM185BQ9H7F4 350 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 CNOT2Q9NZN8 540 aaKnown RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 OR2W5A6NFC9 320 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 NPIPA5E9PKD4 350 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 NCR1O76036 304 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 AK1P00568 194 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 OPN1LWP04000 364 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 CDC20Q12834 499 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 SGCBQ16585 318 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 TRMT12Q53H54 448 aaKnown RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 MRPL2Q5T653 305 aaKnown RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 BCDIN3DQ7Z5W3 292 aaKnown RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ZNF619Q8N2I2 560 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ACBD7Q8N6N7 88 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ANKRD53Q8N9V6 530 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 NR4A3Q92570 626 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 NEURL3Q96EH8 262 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 MSLNLQ96KJ4 702 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 THAP7Q9BT49 309 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ZNF471Q9BX82 626 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-218ENST00000482171 GLTPQ9NZD2 209 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 ADAM29Q9UKF5 820 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 NPIPA1Q9UND3 350 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 SIT1Q9Y3P8 196 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 CDH10Q9Y6N8 788 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 APC2O95996 2303 aa10.54□□□□□ -0.72
SMPD4-218ENST00000482171 TRAV27A0A087WT01 109 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ZNF726A6NNF4 738 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 DISC1C4P0D8 188 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ARPC5O15511 151 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SWI5Q1ZZU3 235 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SLC48A1Q6P1K1 146 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ZCCHC12Q6PEW1 402 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ARSKQ6UWY0 536 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PAQR7Q86WK9 346 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 TMEM239Q8WW34 195 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PPP1R14AQ96A00 147 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ZC3H10Q96K80 434 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 TSNAXQ99598 290 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SLIRPQ9GZT3 109 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 RBFOX1Q9NWB1 397 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 NPAP1Q9NZP6 1156 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 CLEC2DQ9UHP7 191 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PCDHGA6Q9Y5G7 932 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 MIA3Q5JRA6 1907 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 B8ZZF3 427 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SCO1O75880 301 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 KCNK2O95069 426 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 CD2P06729 351 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ARSBP15848 533 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 COL9A1P20849 921 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SCGB2B2Q4G0G5 96 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PRAMEF17Q5VTA0 474 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ELP2Q6IA86 826 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 IL20RBQ6UXL0 311 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ATCAYQ86WG3 371 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SPERTQ8NA61 448 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SYT14Q8NB59 555 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ELP4Q96EB1 424 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SAP130Q9H0E3 1048 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PLEKHA1Q9HB21 404 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ATPIF1Q9UII2 106 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ARID1AO14497 2285 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 GXYLT2A0PJZ3 443 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 C5orf51A6NDU8 294 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PLRG1O43660 514 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ZNF432O94892 652 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ALDOBP05062 364 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 MYF5P13349 255 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 GABRG2P18507 467 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 GIFP27352 417 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 KCNAB1Q14722 419 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SMAD2Q15796 467 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 NKG7Q16617 165 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 MCEMP1Q8IX19 187 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 ZMYND19Q96E35 227 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 CRB3Q9BUF7 120 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 VDAC3Q9Y277 283 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 A3GALT2U3KPV4 340 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PDCD5O14737 125 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 IL1AP01583 271 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SPARCP09486 303 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms