RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TAPBPO15533 448 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 RS1O15537 224 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 PRKYO43930 277 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 TBL1XO60907 577 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 UGT2B17O75795 530 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 GNA14O95837 355 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 UGT2B4P06133 528 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 DUX4L4P0CJ87 422 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 CALB2P22676 271 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 MMP11P24347 488 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 PRKXP51817 358 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 KYAT1Q16773 422 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 TPD52L1Q16890 204 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-210ENST00000482158 SLC25A52Q3SY17 297 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 C10orf120Q5SQS8 335 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 KCNIP4Q6PIL6 250 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 SCARA5Q6ZMJ2 495 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 DNM1P46Q6ZS02 220 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 MOB3BQ86TA1 216 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 LCA5Q86VQ0 697 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 TGIF2LYQ8IUE0 185 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 SVOPLQ8N434 492 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 OR1F12Q8NHA8 337 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 C7orf34Q96L11 122 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 ZSCAN5AQ9BUG6 496 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 EDEM2Q9BV94 578 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
SF3B1-210ENST00000482158 ISG20L2Q9H9L3 353 aaKnown RBP3.97□□□□□ -1.77
SF3B1-210ENST00000482158 SLC17A5Q9NRA2 495 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 IL36GQ9NZH8 169 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 RNF14Q9UBS8 474 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 MAD1L1Q9Y6D9 718 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 KDRP35968 1356 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 LAP3P28838 519 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 SLC26A2P50443 739 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 ZNF45Q02386 682 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 C1orf61Q13536 156 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 CFAP221Q4G0U5 840 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 ZNF589Q86UQ0 364 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-210ENST00000482158 DHRSXQ8N5I4 330 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 FAM133AQ8N9E0 248 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 SYT14Q8NB59 555 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 BBS1Q8NFJ9 593 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 OR4D9Q8NGE8 314 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 OR4D5Q8NGN0 318 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 FRAT1Q92837 279 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-210ENST00000482158 TRIM44Q96DX7 344 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-210ENST00000482158 PHYHIPLQ96FC7 376 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 B3GALT6Q96L58 329 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 MAGEB18Q96M61 343 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 KLHDC3Q9BQ90 382 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 NIPSNAP3BQ9BS92 247 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 CNPY3Q9BT09 278 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 PTGES2Q9H7Z7 377 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 AATFQ9NY61 560 aaKnown RBP eCLIP3.96□□□□□ -1.78
SF3B1-210ENST00000482158 PCSK1NQ9UHG2 260 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 SNX6Q9UNH7 406 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 PLLPQ9Y342 182 aa3.96□□□□□ -1.78
SF3B1-210ENST00000482158 AK6Q9Y3D8 172 aaKnown RBP3.96□□□□□ -1.78
SF3B1-210ENST00000482158 THSD7BQ9C0I4 1608 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 TDRD6O60522 2096 aaKnown RBP3.95□□□□□ -1.78
SF3B1-210ENST00000482158 A0A0G2JRQ6 117 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 LRP5LA4QPB2 252 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 HCN1O60741 890 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 ECI2O75521 394 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 SPAG6O75602 509 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 SLITRK3O94933 977 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 IGHG4P01861 327 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 POLR2EP19388 210 aaKnown RBP3.95□□□□□ -1.78
SF3B1-210ENST00000482158 BTDP43251 543 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 IFNAR2P48551 515 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 IL34Q6ZMJ4 242 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 TMEM179BQ7Z7N9 219 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 ZNF683Q8IZ20 524 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 TMEM123Q8N131 208 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 OR56B4Q8NH76 319 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 PIGCQ92535 297 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 EMG1Q92979 244 aaKnown RBP3.95□□□□□ -1.78
SF3B1-210ENST00000482158 TGM7Q96PF1 710 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 TBX15Q96SF7 602 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 SLC35A5Q9BS91 424 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 SPATA16Q9BXB7 569 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 ZNF385DQ9H6B1 395 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 PIPOXQ9P0Z9 390 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 TBK1Q9UHD2 729 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 MEMO1Q9Y316 297 aa3.95□□□□□ -1.78
SF3B1-210ENST00000482158 METTL21EPA6NDL7 271 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 ARPC3O15145 178 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 LRATO95237 230 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 LALBAP00709 142 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 ALOX5P09917 674 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 RNH1P13489 461 aaKnown RBP3.94□□□□□ -1.78
SF3B1-210ENST00000482158 CD1EP15812 388 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 HOXD10P28358 340 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 LEPP41159 167 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 HNRNPA3P51991 378 aaKnown RBP3.94□□□□□ -1.78
SF3B1-210ENST00000482158 ARFIP1P53367 373 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 RIPK4P57078 832 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms