RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 PTPMT1Q8WUK0 201 aaPredicted RBP13.32□□□□□ -0.28
CHD3-211ENST00000481999 MED18Q9BUE0 208 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 COL25A1Q9BXS0 654 aaPredicted RBP13.32□□□□□ -0.28
CHD3-211ENST00000481999 SRRQ9GZT4 340 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 TMEM165Q9HC07 324 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 EPHA6Q9UF33 1036 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 SATB2Q9UPW6 733 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 CARD8Q9Y2G2 431 aa13.32□□□□□ -0.28
CHD3-211ENST00000481999 EXOSC1Q9Y3B2 195 aaKnown RBP13.32□□□□□ -0.28
CHD3-211ENST00000481999 CFIP05156 583 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 SLC9A3P48764 834 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 ZNF79Q15937 498 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 C22orf42Q6IC83 251 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 TMEM53Q6P2H8 277 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 ZSCAN1Q8NBB4 408 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 OR4Q3Q8NH05 313 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 ACOT11Q8WXI4 607 aaPredicted RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 EDAQ92838 391 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 SLC35B4Q969S0 331 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 TMEM203Q969S6 136 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 FITM1A5D6W6 292 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 SLC30A4O14863 429 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 LRRTM2O43300 516 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 IL7P13232 177 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 MAKP20794 623 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 ARRB1P49407 418 aaPredicted RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 FXYD6P3P58550 94 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 IGLV3-21P80748 117 aaPredicted RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 HNRNPA0Q13151 305 aaKnown RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 TCTE1Q5JU00 501 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 FAM69BQ5VUD6 431 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 HSDL2Q6YN16 418 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 PLXDC1Q8IUK5 500 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 UBQLNLQ8IYU4 475 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 MAML2Q8IZL2 1156 aaPredicted RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 FAM181AQ8N9Y4 354 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 POGLUT1Q8NBL1 392 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 PIGXQ8TBF5 258 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 UFD1Q92890 307 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 SENP5Q96HI0 755 aaPredicted RBP13.31□□□□□ -0.28
CHD3-211ENST00000481999 FGF21Q9NSA1 209 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 NLGN3Q9NZ94 848 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 OR10H1Q9Y4A9 318 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 U3KQA8 63 aa13.31□□□□□ -0.28
CHD3-211ENST00000481999 A0A1W2PQM1 296 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 FAM183AA6NL82 134 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 KDM4EB2RXH2 506 aaPredicted RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 SIGLEC6O43699 453 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 KRT8P05787 483 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 THBS1P07996 1170 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 NGFRP08138 427 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 MSL3P1P0C860 447 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 TGM4P49221 684 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 EPHA4P54764 986 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 SCN1BQ07699 218 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 GPR50Q13585 617 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 BAK1Q16611 211 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 TMEM44Q2T9K0 475 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 HLA-BQ31612 363 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 OR2G6Q5TZ20 316 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 RSBN1Q5VWQ0 802 aaPredicted RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 PMS2CLQ68D20 193 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 FCRLBQ6BAA4 426 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 SMARCD3Q6STE5 483 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 ANKK1Q8NFD2 765 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 BBS1Q8NFJ9 593 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 TM9SF4Q92544 642 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 AP3S1Q92572 193 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 RELTQ969Z4 430 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 C1GALT1C1Q96EU7 318 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 TEX12Q9BXU0 123 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 CACYBPQ9HB71 228 aaKnown RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 ABCB9Q9NP78 766 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 LOC400499M0QZD8 3231 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 IGHV3-20A0A0C4DH32 117 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 LRRN3E7EW58 273 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 COQ9O75208 318 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 GSTT2P0CG29 244 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 GSTT2BP0CG30 244 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 AZGP1P25311 298 aaKnown RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 EPHA8P29322 1005 aaPredicted RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 HTR3AP46098 478 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 GLYR1Q49A26 553 aaPredicted RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 DDI2Q5TDH0 399 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 XKRXQ6PP77 449 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 FAM131AQ6UXB0 335 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 ZNF517Q6ZMY9 492 aaPredicted RBP13.3□□□□□ -0.28
CHD3-211ENST00000481999 LANCL3Q6ZV70 420 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 BCORP1Q8N888 145 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 RFKQ969G6 155 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 ZNF524Q96C55 264 aa13.3□□□□□ -0.28
CHD3-211ENST00000481999 DNAJA3Q96EY1 480 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms