RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 FGD3Q5JSP0 725 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 ATP1A1-AS1Q5TC04 95 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 LPCAT4Q643R3 524 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 TIGD3Q6B0B8 471 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 C1orf94Q6P1W5 598 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 FAHD1Q6P587 224 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 TTC33Q6PID6 262 aaPredicted RBP9.26□□□□□ -0.93
USP39-215ENST00000481409 CBLN3Q6UW01 205 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 MBOAT2Q6ZWT7 520 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 STK32CQ86UX6 486 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 EPHX4Q8IUS5 362 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 CDK20Q8IZL9 346 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 SLC43A2Q8N370 569 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 GATSQ8NAP1 163 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 MDS2Q8NDY4 140 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 OR10G2Q8NGC3 310 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 OR4K17Q8NGC6 315 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 OR6S1Q8NH40 331 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 SLC7A13Q8TCU3 470 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 NRG4Q8WWG1 115 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 C5orf34Q96MH7 638 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 HS3ST6Q96QI5 342 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 WFDC6Q9BQY6 131 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 DGCR6LQ9BY27 220 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 COQ10BQ9H8M1 238 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 SERINC1Q9NRX5 453 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 MAN2C1Q9NTJ4 1040 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 QPCTLQ9NXS2 382 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 PDP1Q9P0J1 537 aaPredicted RBP9.26□□□□□ -0.93
USP39-215ENST00000481409 KIF17Q9P2E2 1029 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 B4GALT7Q9UBV7 327 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 SLC7A7Q9UM01 511 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 POFUT2Q9Y2G5 429 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 MED31Q9Y3C7 131 aa9.26□□□□□ -0.93
USP39-215ENST00000481409 SPIN1Q9Y657 262 aaPredicted RBP9.26□□□□□ -0.93
USP39-215ENST00000481409 TRAV17A0A0B4J275 112 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 SAC3D1A6NKF1 404 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 EI24O14681 340 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZNF208O43345 1280 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 FRS3O43559 492 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 NME2P1O60361 137 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 NUDT14O95848 222 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 SP1P08047 785 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 CCL3P10147 92 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZNF17P17021 662 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 NME2P22392 152 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ELK4P28324 431 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 SRD5A2P31213 254 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 RYKP34925 604 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 MASP1P48740 699 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 CLK1P49759 484 aaKnown RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 CCR4P51679 360 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 CTBP2P56545 445 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ARG2P78540 354 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 SRSF6Q13247 344 aaKnown RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 QPRTQ15274 297 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 TAF11Q15544 211 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 HYAL4Q2M3T9 481 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ELOA3BQ3SY89 546 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ANKDD1AQ495B1 522 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZNF468Q5VIY5 522 aaPredicted RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 KDM4DQ6B0I6 523 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 DESI1Q6ICB0 168 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZNF770Q6IQ21 691 aaPredicted RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 SLC25A25Q6KCM7 469 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 RPL13AP3Q6NVV1 102 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 PODNL1Q6PEZ8 512 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 BORAQ6PGQ7 559 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZNF730Q6ZMV8 503 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ATG4DQ86TL0 474 aaPredicted RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 PARP8Q8N3A8 854 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 CADM2Q8N3J6 435 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 CBR4Q8N4T8 237 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 WDSUB1Q8N9V3 476 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ATG16L2Q8NAA4 619 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 FAM98AQ8NCA5 519 aaKnown RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 FDCSPQ8NFU4 85 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ELOA3Q8NG57 546 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 OR2M3Q8NG83 312 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 OR52J3Q8NH60 311 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 PIGXQ8TBF5 258 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 GNPDA2Q8TDQ7 276 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 STK35Q8TDR2 534 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 TMEM239Q8WW34 195 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 C3orf49Q96BT1 292 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 C1GALT1C1Q96EU7 318 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 SCMH1Q96GD3 660 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZNF184Q99676 751 aaPredicted RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 RTN4RQ9BZR6 473 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 Q9H521 79 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 PROK2Q9HC23 129 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 GALNT9Q9HCQ5 603 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 ZFP64Q9NPA5 681 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 SMPD3Q9NY59 655 aaPredicted RBP9.25□□□□□ -0.93
USP39-215ENST00000481409 U3KQV3 271 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 WDFY3Q8IZQ1 3526 aa9.25□□□□□ -0.93
USP39-215ENST00000481409 CFAP54Q96N23 3096 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 A0A087WUU8 490 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms