RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PAHP00439 452 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 KITLGP21583 273 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CD1BP29016 333 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CD80P33681 288 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 BMI1P35226 326 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 ACLYP53396 1101 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CRYBB1P53674 252 aaPredicted RBP4.36□□□□□ -1.71
COPA-203ENST00000481040 DLX5P56178 289 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 FHL1Q13642 323 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 DPYSL3Q14195 570 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 ZNF146Q15072 292 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 MS4A18Q3C1V0 323 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 TEX44Q53QW1 395 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 LGSNQ5TDP6 509 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 STPG1Q5TH74 334 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SLC8B1Q6J4K2 584 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 C19orf35Q6ZS72 473 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SCD5Q86SK9 330 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 ZFAND4Q86XD8 727 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 METTL4Q8N3J2 472 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CATSPER1Q8NEC5 780 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SSC4DQ8WTU2 575 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SCARB1Q8WTV0 552 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 GLYATL2Q8WU03 294 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 TRUB1Q8WWH5 349 aaKnown RBP4.36□□□□□ -1.71
COPA-203ENST00000481040 CRYGNQ8WXF5 182 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 FAF2Q96CS3 445 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CXorf40BQ96DE9 158 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 PRRC1Q96M27 445 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SIKE1Q9BRV8 207 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SLC35A5Q9BS91 424 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 PARLQ9H300 379 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CYP3A43Q9HB55 503 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 ABCC13Q9NSE7 274 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 NUDT4Q9NZJ9 180 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 GAB2Q9UQC2 676 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 TRAF3IP3Q9Y228 551 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 PDE10AQ9Y233 779 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 CPQQ9Y646 472 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 COMMD3-BMI1R4GMX3 469 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 FRMPD3Q5JV73 1810 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SCN5AQ14524 2016 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 EIF4G1Q04637 1599 aaKnown RBP4.36□□□□□ -1.71
COPA-203ENST00000481040 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 PFKFB2O60825 505 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 TMEM50AO95807 157 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 P04436 131 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 SERPIND1P05546 499 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ERCC1P07992 297 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 SNRPCP09234 159 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 ZNF853P0CG23 659 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 PVRP15151 417 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ARHGDIAP52565 204 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 NDUFV3P56181 108 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 GNB1P62873 340 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ASPHQ12797 758 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 IL18R1Q13478 541 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ZNF77Q15935 545 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 CCL14Q16627 93 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 TRIM16LQ309B1 348 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 PLCXD3Q63HM9 321 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 GDPGP1Q6ZNW5 385 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 SLC47A2Q86VL8 602 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ERICH1Q86X53 443 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ERI1Q8IV48 349 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 CCDC65Q8IXS2 484 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 OR2L13Q8N349 312 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 BBS1Q8NFJ9 593 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ACMSDQ8TDX5 336 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 TOMM40LQ969M1 308 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 KIAA1143Q96AT1 154 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 SGK3Q96BR1 496 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ZNF707Q96C28 371 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 PPP1R16AQ96I34 528 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ZNF578Q96N58 590 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 PANX2Q96RD6 677 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 MBOAT4Q96T53 435 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 CNN2Q99439 309 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 LGMNQ99538 433 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 MAPKAP1Q9BPZ7 522 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ZNF670Q9BS34 389 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 ANKRD60Q9BZ19 345 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 BLZF1Q9H2G9 400 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 PPA2Q9H2U2 334 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 TDRD3Q9H7E2 651 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 NHEJ1Q9H9Q4 299 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 EXOSC3Q9NQT5 275 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 CHRAC1Q9NRG0 131 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 C20orf96Q9NUD7 363 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 NDE1Q9NXR1 346 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 EHFQ9NZC4 300 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 PTTG3PQ9NZH4 202 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 THAP10Q9P2Z0 257 aaPredicted RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 SPATA2Q9UM82 520 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 MRPS28Q9Y2Q9 187 aaKnown RBP4.35□□□□□ -1.71
COPA-203ENST00000481040 USP16Q9Y5T5 823 aa4.35□□□□□ -1.71
COPA-203ENST00000481040 AUP1Q9Y679 476 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms