RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RORBQ92753 470 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 GGHQ92820 318 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TMIGD2Q96BF3 282 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 C3orf49Q96BT1 292 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TMCO6Q96DC7 493 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 ARSGQ96EG1 525 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 CRELD1Q96HD1 420 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 DOK1Q99704 481 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TSSK6Q9BXA6 273 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 CDCA4Q9BXL8 241 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PLA2G12AQ9BZM1 189 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 NRSN2Q9GZP1 204 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 CCDC90BQ9GZT6 254 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 DSN1Q9H410 356 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 FN3KQ9H479 309 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 EGLN3Q9H6Z9 239 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 MRPS18AQ9NVS2 196 aaKnown RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TVP23BQ9NYZ1 205 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PTTG2Q9NZH5 202 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PADI1Q9ULC6 663 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 B3GALT1Q9Y5Z6 326 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 IGHV1-45A0A0A0MS14 117 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 KDM4EB2RXH2 506 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 CDC42EP2O14613 210 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PRODHO43272 600 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PRKYO43930 277 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PRKNO60260 465 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 ENTPD6O75354 484 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PTP4A3O75365 173 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 CSO75390 466 aaKnown RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 KLF7O75840 302 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 STK17BO94768 372 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 MT-CO3P00414 261 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 UMODP07911 640 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PGCP20142 388 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 MAKP20794 623 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 ACVR2AP27037 513 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 EVI2BP34910 448 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SLC1A3P43003 542 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 P2RX1P51575 399 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 DLX5P56178 289 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 IRF3Q14653 427 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SNAPC1Q16533 368 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PLAG1Q6DJT9 500 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SMARCD3Q6STE5 483 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 C6orf15Q6UXA7 325 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 B3GNT6Q6ZMB0 384 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PIP4P1Q86T03 277 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 ATG4DQ86TL0 474 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 DND1Q8IYX4 353 aaKnown RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 LNX2Q8N448 690 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 GALNT6Q8NCL4 622 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 OR5W2Q8NH69 310 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SGCDQ92629 289 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 HGDQ93099 445 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SGTBQ96EQ0 304 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 IMMP1LQ96LU5 166 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 DPH1Q9BZG8 443 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SPRY4Q9C004 299 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 ADAM19Q9H013 955 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 RACGAP1Q9H0H5 632 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 IRF2BPLQ9H1B7 796 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 OR52D1Q9H346 318 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 ACOT13Q9NPJ3 140 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 MEPEQ9NQ76 525 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 MYOTQ9UBF9 498 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 AASSQ9UDR5 926 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 SIGLEC7Q9Y286 467 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 CARD8Q9Y2G2 431 aa10.08□□□□□ -0.8
VTI1A-204ENST00000480057 PTRH2Q9Y3E5 179 aaKnown RBP10.08□□□□□ -0.8
VTI1A-204ENST00000480057 CDC14CA4D256 554 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 TMEM200CA6NKL6 621 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ELOA3DA6NLF2 546 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 AGRPO00253 132 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 BHLHE40O14503 412 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 PLD2O14939 933 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SURF4O15260 269 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 OIP5O43482 229 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 TLX2O43763 284 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 GDF9O60383 454 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 NOL3O60936 208 aaKnown RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 TRMUO75648 421 aaKnown RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 NTN1O95631 604 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 FBXO45P0C2W1 286 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 JMJD7P0C870 316 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SAGP10523 405 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SLC6A6P31641 620 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ETV5P41161 510 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 MASP1P48740 699 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF117Q03924 483 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 PIGFQ07326 219 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SPEM2Q0P670 501 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 TMED1Q13445 227 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 CBFBQ13951 182 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms