RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TPMTP51580 245 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 CDH4P55283 916 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 KIAA0141Q14154 515 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 ARHGAP19Q14CB8 494 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 ZRSR1Q15695 479 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF585BQ52M93 769 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SFT2D3Q587I9 215 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SEL1L2Q5TEA6 688 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 PWWP2BQ6NUJ5 590 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 CLEC2AQ6UVW9 174 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 C3P1Q6ZMU1 363 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 PSTKQ8IV42 348 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 OR52B6Q8NGF0 335 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 C11orf24Q96F05 449 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 PRICKLE1Q96MT3 831 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SLC38A2Q96QD8 506 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 MTMR9Q96QG7 549 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 MEIS3Q99687 375 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 FEM1AQ9BSK4 669 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SLC17A5Q9NRA2 495 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF446Q9NWS9 450 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 IL36GQ9NZH8 169 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SEC14L4Q9UDX3 406 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SNED1Q8TER0 1413 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 RANBP2P49792 3224 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 WDR81Q562E7 1941 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 IGHV3-38A0A0C4DH36 116 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 FER1L5A0AVI2 2057 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 HEATR9A2RTY3 570 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 BMP15O95972 392 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ALOX5P09917 674 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ALPIP09923 528 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 H2AFXP16104 143 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 COL4A5P29400 1685 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 MMP12P39900 470 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 RGS1Q08116 209 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 MESDQ14696 234 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 UPP1Q16831 310 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 LIPNQ5VXI9 398 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 LRRC66Q68CR7 880 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 FRRS1Q6ZNA5 592 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ALLCQ8N6M5 410 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF781Q8N8C0 355 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 MFSD9Q8NBP5 474 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 BBOF1Q8ND07 529 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ST8SIA1Q92185 356 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 PEX13Q92968 403 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 NABP1Q96AH0 204 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 LYZL4Q96KX0 146 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 RBM14Q96PK6 669 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 CITED1Q99966 193 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 C19orf43Q9BQ61 176 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 FAM173AQ9BQD7 235 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 CLEC7AQ9BXN2 247 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 STRADBQ9C0K7 418 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 EXO5Q9H790 373 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 RPRD1BQ9NQG5 326 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 SPHK2Q9NRA0 654 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ZDHHC18Q9NUE0 388 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF221Q9UK13 617 aa6.12□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 A0A1W2PNV4 684 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 RNF212BA8MTL3 300 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 DNAJB6O75190 326 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 PATE4P0C8F1 98 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 T-ENOLP0DO92 83 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 RPS12P25398 132 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 HOXD10P28358 340 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 OR1G1P47890 313 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 ERVK-16P61578 105 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 PLOD1Q02809 727 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF33BQ06732 778 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF177Q13360 481 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 FASTKQ14296 549 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 SLC5A12Q1EHB4 618 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF672Q499Z4 452 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 CARD17Q5XLA6 110 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 SCYL2Q6P3W7 929 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 NUFIP2Q7Z417 695 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 MOB3BQ86TA1 216 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 CARM1Q86X55 608 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 OR51G2Q8NGK0 314 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 TBCKQ8TEA7 893 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 STARD8Q92502 1023 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 C10orf35Q96D05 121 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 MOCOSQ96EN8 888 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 TSSK1BQ9BXA7 367 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 DGCR6LQ9BY27 220 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 PARD6BQ9BYG5 372 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 NXF5Q9H1B4 397 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 B3GAT2Q9NPZ5 323 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 DEPPQ9NTK1 212 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 FBXO7Q9Y3I1 522 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 MAD1L1Q9Y6D9 718 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 LAMB2P55268 1798 aa6.11□□□□□ -1.43
GAPVD1-217ENST00000479511 PIEZO1Q92508 2521 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 COL2A1P02458 1487 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 FRMPD4Q14CM0 1322 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 ARPC4-TTLL3A0A0A6YYG9 625 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms