RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ZNF550Q7Z398 422 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 ADGRE4PQ86SQ3 457 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 C10orf111Q8N326 155 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 POU5F2Q8N7G0 328 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 TNIP2Q8NFZ5 429 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 OR10A6Q8NH74 314 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 LILRB4Q8NHJ6 448 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 RCN3Q96D15 328 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 CMTM5Q96DZ9 223 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 KLHL15Q96M94 604 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 NPAS1Q99742 590 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 ECSITQ9BQ95 431 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 SLC39A3Q9BRY0 314 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 PINK1Q9BXM7 581 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 TRIM8Q9BZR9 551 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 TMEM185BQ9H7F4 350 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 CHST11Q9NPF2 352 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 CLCF1Q9UBD9 225 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 ZNF175Q9Y473 711 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 SPIN1Q9Y657 262 aaPredicted RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 USP9YO00507 2555 aaPredicted RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 SPTAN1Q13813 2472 aaKnown RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 DVL2O14641 736 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 FCGR2AP12318 317 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 HTR1EP28566 365 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 SFTPDP35247 375 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 HTR3AP46098 478 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 IDH2P48735 452 aaKnown RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 CLDN15P56746 228 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 EEF1A1P68104 462 aaKnown RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 ADRM1Q16186 407 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 INTS11Q5TA45 600 aaKnown RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 EEF1A1P5Q5VTE0 462 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 C3orf33Q6P1S2 294 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 GRINAQ7Z429 371 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 NET1Q7Z628 596 aaPredicted RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 ARPINQ7Z6K5 226 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 GGNQ86UU5 652 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 BHLHE22Q8NFJ8 381 aaPredicted RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 MYLK2Q9H1R3 596 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 EFCAB1Q9HAE3 211 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 KCNJ16Q9NPI9 418 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 TIGARQ9NQ88 270 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 SLC13A4Q9UKG4 626 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 MCTS1Q9ULC4 181 aaKnown RBP18.44■□□□□ 0.54
VARS-224ENST00000479051 AP3M1Q9Y2T2 418 aa18.44■□□□□ 0.54
VARS-224ENST00000479051 FAM90A27PA6NNH2 459 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 H0YC42 278 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 FXYD1O00168 92 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 FAAHO00519 579 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 AIM2O14862 343 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 ADAMDEC1O15204 470 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 TOXO94900 526 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 SYNGR4O95473 234 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 SLC7A1P30825 629 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PRKAR1BP31321 381 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 APOBEC1P41238 236 aaKnown RBP18.43■□□□□ 0.54
VARS-224ENST00000479051 TPD52P55327 224 aaPredicted RBP18.43■□□□□ 0.54
VARS-224ENST00000479051 COPZ1P61923 177 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 EPS8Q12929 822 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 SLC25A35Q3KQZ1 300 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 HBMQ6B0K9 141 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 OR2A2Q6IF42 318 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PPP4R4Q6NUP7 873 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PLEKHM3Q6ZWE6 761 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PIGWQ7Z7B1 504 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PTOV1Q86YD1 416 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 C9orf106Q8NAJ2 232 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 ATP6V1C2Q8NEY4 427 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 OR2V1Q8NHB1 315 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 SLC25A43Q8WUT9 341 aaPredicted RBP18.43■□□□□ 0.54
VARS-224ENST00000479051 SLC35B4Q969S0 331 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PRRG4Q9BZD6 226 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 RLIMQ9NVW2 624 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 FAM53CQ9NYF3 392 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 ZNF629Q9UEG4 869 aaPredicted RBP18.43■□□□□ 0.54
VARS-224ENST00000479051 HEATR5AQ86XA9 2040 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 ICE1Q9Y2F5 2266 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 PTPN13Q12923 2485 aa18.43■□□□□ 0.54
VARS-224ENST00000479051 COL12A1Q99715 3063 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 KDM4EB2RXH2 506 aaPredicted RBP18.42■□□□□ 0.54
VARS-224ENST00000479051 TNFSF11O14788 317 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 DCTN3O75935 186 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 RCBTB2O95199 551 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 OPN1LWP04000 364 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 TMIGD3P0DMS9 266 aaPredicted RBP18.42■□□□□ 0.54
VARS-224ENST00000479051 IL11P20809 199 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 CTSSP25774 331 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 FKBP2P26885 142 aaKnown RBP18.42■□□□□ 0.54
VARS-224ENST00000479051 AQP1P29972 269 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 PRDX6P30041 224 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 PCGF2P35227 344 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 OPRM1P35372 400 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 DLX5P56178 289 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 PLAURQ03405 335 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 PON3Q15166 354 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 TMEM176BQ3YBM2 270 aaPredicted RBP18.42■□□□□ 0.54
VARS-224ENST00000479051 RABL3Q5HYI8 236 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 POMZP3Q6PJE2 187 aa18.42■□□□□ 0.54
VARS-224ENST00000479051 TREML1Q86YW5 311 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms