RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TRNT1Q96Q11 434 aaKnown RBP13.1□□□□□ -0.31
USP11-207ENST00000478596 BTBD10Q9BSF8 475 aa13.1□□□□□ -0.31
USP11-207ENST00000478596 TBL1XR1Q9BZK7 514 aa13.1□□□□□ -0.31
USP11-207ENST00000478596 EML6Q6ZMW3 1958 aa13.1□□□□□ -0.31
USP11-207ENST00000478596 NPIPA5A0A0B4J1W7 369 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 ELOVL7A1L3X0 281 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 OR6C70A6NIJ9 312 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 AHRRA9YTQ3 701 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 NPIPA7E9PJI5 369 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 SCO2O43819 266 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 ICOSLGO75144 302 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 TNFRSF21O75509 655 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 DNAJC8O75937 253 aaPredicted RBP13.09□□□□□ -0.31
USP11-207ENST00000478596 IL33O95760 270 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 IL2RAP01589 272 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 P04436 131 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 CHRM4P08173 479 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 NPIPA8P0DM63 369 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 CYP4B1P13584 511 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 CNR1P21554 472 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 PGM1P36871 562 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 NCALDP61601 193 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 FUT5Q11128 374 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 VMACQ2NL98 169 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 ACSF3Q4G176 576 aaPredicted RBP13.09□□□□□ -0.31
USP11-207ENST00000478596 PRAMEF20Q5VT98 475 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 C8orf82Q6P1X6 216 aaPredicted RBP13.09□□□□□ -0.31
USP11-207ENST00000478596 OLIG3Q7RTU3 272 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 HMGN2P46Q86SG4 172 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 C10orf111Q8N326 155 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 TMCO5AQ8N6Q1 288 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 OR10G3Q8NGC4 313 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 SPPL2AQ8TCT8 520 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 IGFBPL1Q8WX77 278 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 HOXB13Q92826 284 aaPredicted RBP13.09□□□□□ -0.31
USP11-207ENST00000478596 FAM162AQ96A26 154 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 C1orf21Q9H246 121 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 TMEM38AQ9H6F2 299 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 EXO5Q9H790 373 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 UBTD1Q9HAC8 227 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 TMEM181Q9P2C4 612 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 ABCD2Q9UBJ2 740 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 SLC13A4Q9UKG4 626 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
USP11-207ENST00000478596 EEF1E1-BLOC1S5C9J1V9 151 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 G3V3Y1 287 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 H3BNH8 94 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 EEF1E1O43324 174 aaKnown RBP13.08□□□□□ -0.32
USP11-207ENST00000478596 KIAA0513O60268 411 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 UGT2B11O75310 529 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 CIB2O75838 187 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 IL18BPO95998 194 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 IGKV1D-16P01601 117 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 BMP2P12643 396 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 NAGAP17050 411 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 OPRM1P35372 400 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 THBS2P35442 1172 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 CPOXP36551 454 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 MAP3K8P41279 467 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 MASP1P48740 699 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 RNF144AP50876 292 aaPredicted RBP13.08□□□□□ -0.32
USP11-207ENST00000478596 PNLIPRP2P54317 469 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 NTRK2Q16620 822 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.08□□□□□ -0.32
USP11-207ENST00000478596 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
USP11-207ENST00000478596 LRRC74BQ6ZQY2 392 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 NET1Q7Z628 596 aaPredicted RBP13.08□□□□□ -0.32
USP11-207ENST00000478596 PEX5LQ8IYB4 626 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 METTL25Q8N6Q8 603 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 SLC38A5Q8WUX1 472 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 NTNG2Q96CW9 530 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 SDF2Q99470 211 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 SPATA5L1Q9BVQ7 753 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 OSBPL11Q9BXB4 747 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 ZNF350Q9GZX5 532 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
USP11-207ENST00000478596 ZNF701Q9NV72 531 aaPredicted RBP13.08□□□□□ -0.32
USP11-207ENST00000478596 USP22Q9UPT9 525 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 GMEB1Q9Y692 573 aa13.08□□□□□ -0.32
USP11-207ENST00000478596 DEFB108AA8MXU0 73 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
USP11-207ENST00000478596 TSPAN2O60636 221 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 ZNF354AO60765 605 aaPredicted RBP13.07□□□□□ -0.32
USP11-207ENST00000478596 CTSSP25774 331 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 LCN1P31025 176 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 EVI2BP34910 448 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 KCNJ2P63252 427 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 CHRNEQ04844 493 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 BNIP2Q12982 314 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 GRAMD1BQ3KR37 738 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 FRRS1Q6ZNA5 592 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms