RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PDK3Q15120 406 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 KLHL26Q53HC5 615 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 TEX35Q5T0J7 233 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 NOXRED1Q6NXP6 359 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 WDR31Q8NA23 367 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 C16orf58Q96GQ5 468 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 EGLN2Q96KS0 407 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 C1QTNF6Q9BXI9 259 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 TMEFF2Q9UIK5 374 aaPredicted RBP17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 A0A0A6YYJ9 748 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 SLCO1B7G3V0H7 640 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 H3BNH8 94 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 VENTXO95231 258 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 ITGA5P08648 1049 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 IMPDH1P20839 514 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 DIO1P49895 249 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 C2orf54Q08AI8 447 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 IMPG1Q17R60 797 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 ZSWIM7Q19AV6 140 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 NDUFAF6Q330K2 333 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 ANKRD26P1Q6NSI1 321 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 C17orf78Q8N4C9 275 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 JADE3Q92613 823 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 PAFAH2Q99487 392 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 FUT8Q9BYC5 575 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 DUSP22Q9NRW4 184 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 GIN1Q9NXP7 522 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 NINJ2Q9NZG7 142 aa17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 NOSIPQ9Y314 301 aaKnown RBP17.71■□□□□ 0.43
PDLIM1-202ENST00000477757 LRP5LA4QPB2 252 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 ZNF716A6NP11 495 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 RSL1D1O76021 490 aaKnown RBP17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 ATP6V1C1P21283 382 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 FRKP42685 505 aaPredicted RBP17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 FOXA1P55317 472 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 SLC25A3Q00325 362 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 MLC1Q15049 377 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 QPRTQ15274 297 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 ZNF385BQ569K4 471 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 LRIG3Q6UXM1 1119 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 ANKS4BQ8N8V4 417 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 C1orf162Q8NEQ5 155 aaPredicted RBP17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 HPS1Q92902 700 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 CDS1Q92903 461 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 ARL8AQ96BM9 186 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 L3HYPDHQ96EM0 354 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 STACQ99469 402 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 HOXD1Q9GZZ0 328 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 ANKZF1Q9H8Y5 726 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 AMDHD2Q9Y303 409 aa17.7■□□□□ 0.42
PDLIM1-202ENST00000477757 NPIPA5A0A0B4J1W7 369 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 TRIM49D1C9J1S8 452 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 NPIPA7E9PJI5 369 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 NPIPB8E9PQR5 432 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 PDLIM1O00151 329 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 TBX19O60806 448 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 NPIPA8P0DM63 369 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 FOXG1P55316 489 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 CSNK2A1P68400 391 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 C1QTNF12Q5T7M4 302 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 SLC46A3Q7Z3Q1 461 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 TRIM46Q7Z4K8 759 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 TMCO5AQ8N6Q1 288 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 TOR1AIP2Q8NFQ8 470 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 OR5W2Q8NH69 310 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 SLC17A5Q9NRA2 495 aa17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 ACSS1Q9NUB1 689 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-202ENST00000477757 ESPNB1AK53 854 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 NPIPB9F8W1W9 429 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 GTPBP1O00178 669 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 TACSTD2P09758 323 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 ATP5F1P24539 256 aaPredicted RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 GIFP27352 417 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 APEX1P27695 318 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 IL2RGP31785 369 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 NTF4P34130 210 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 CHN2P52757 468 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 PRKAA2P54646 552 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 ACTG1P63261 375 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 TIGD2Q4W5G0 525 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 TMPPEQ6ZT21 453 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 MTDHQ86UE4 582 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 C3orf56Q8N813 242 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 LINC01356Q8N9X3 169 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 PPCDCQ96CD2 204 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 VRK1Q99986 396 aaPredicted RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 QRSL1Q9H0R6 528 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 PIGUQ9H490 435 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 GSTO2Q9H4Y5 243 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 ZDHHC18Q9NUE0 388 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 METRNQ9UJH8 293 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 DCTN4Q9UJW0 460 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 MOKQ9UQ07 419 aa17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 HEATR1Q9H583 2144 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-202ENST00000477757 SULT2B1O00204 365 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 GPR171O14626 319 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 HMGN2P05204 90 aaKnown RBP17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 CCR4P51679 360 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 SLC16A1P53985 500 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms