RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 NUFIP1Q9UHK0 495 aaKnown RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 AK6Q9Y3D8 172 aaKnown RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 ANK1P16157 1881 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 LCN1P31025 176 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 MAZP56270 477 aaKnown RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 CAV3P56539 151 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PPP2CBP62714 309 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PPP2CAP67775 309 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 SLC25A25Q6KCM7 469 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 C1orf94Q6P1W5 598 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PHC2Q8IXK0 858 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PRR22Q8IZ63 422 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 ZNF486Q96H40 463 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 ADOQ96SZ5 270 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 THAP7Q9BT49 309 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 CHST8Q9H2A9 424 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 FN3KQ9H479 309 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 HHATLQ9HCP6 504 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 HMX3A6NHT5 357 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PIP5K1CO60331 668 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 NID1P14543 1247 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 MAOBP27338 520 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 PSMA6P60900 246 aaKnown RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 MAT1AQ00266 395 aaKnown RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 SMCO1Q147U7 214 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 HES5Q5TA89 166 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 OLFML2AQ68BL7 652 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 SLC6A19Q695T7 634 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 B3GLCTQ6Y288 498 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 SLC37A2Q8TED4 501 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 ZNF578Q96N58 590 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-220ENST00000477528 MRI1Q9BV20 369 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 RNF167Q9H6Y7 350 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 RARRES3Q9UL19 164 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 POLHQ9Y253 713 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 CORINQ9Y5Q5 1042 aa13.6□□□□□ -0.23
HDAC6-220ENST00000477528 AQP9O43315 295 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 CTNSO60931 367 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 ADH7P40394 386 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SLC6A9P48067 706 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SOWAHCQ53LP3 525 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-220ENST00000477528 TMEM196Q5HYL7 178 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 C6orf183Q5T699 404 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 OR51Q1Q8NH59 317 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SERINC4A6NH21 518 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 GPX5O75715 221 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SNAPC5O75971 98 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 MAS1P04201 325 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 CSN2P05814 226 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 ZFP36L2P47974 494 aaKnown RBP13.59□□□□□ -0.23
HDAC6-220ENST00000477528 CLRN1P58418 232 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 ARFRP1Q13795 201 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 MFSD13AQ14CX5 517 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SCGB2B2Q4G0G5 96 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 TMEM225Q6GV28 225 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 TMEM53Q6P2H8 277 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 ASB6Q9NWX5 421 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 KLHL9Q9P2J3 617 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SCP2D1Q9UJQ7 156 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 OR5K3A6NET4 321 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 OR3A3P47888 321 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 OR3A2P47893 321 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 PXNP49023 591 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-220ENST00000477528 FXNQ16595 210 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SLC43A2Q8N370 569 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 LPAR4Q99677 370 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SLC25A19Q9HC21 320 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 AKIP1Q9NQ31 210 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 SUSD2Q9UGT4 822 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 CHP2O43745 196 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 FCMRO60667 390 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 PRAMEF4O60810 478 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 BMP1P13497 986 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 ETV5P41161 510 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 ETV1P50549 477 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 DCAF7P61962 342 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 PRAMEF9Q5VWM5 478 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 GPAT4Q86UL3 456 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 CCDC36Q8IYA8 594 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 COX14Q96I36 57 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 FCRL1Q96LA6 429 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 NDUFB11Q9NX14 153 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 CACNG2Q9Y698 323 aa13.59□□□□□ -0.23
HDAC6-220ENST00000477528 A0A1W2PPL8 197 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 PSMB10P40306 273 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 CRMP1Q14194 572 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 LRFN4Q6PJG9 635 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 RNASE11Q8TAA1 199 aaKnown RBP13.58□□□□□ -0.24
HDAC6-220ENST00000477528 PNPLA2Q96AD5 504 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 OR10A5Q9H207 317 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 CUTCQ9NTM9 273 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF224Q9NZL3 707 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 ABRACLQ9P1F3 81 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 SLC22A7Q9Y694 548 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 MICAL3Q7RTP6 2002 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 POU2F2P09086 479 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 TGFBR1P36897 503 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 NR4A2P43354 598 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms