RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 C16orf58Q96GQ5 468 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 PRMT6Q96LA8 375 aaPredicted RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 ZNF285Q96NJ3 590 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 SERPINB12Q96P63 405 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 OLFM1Q99784 485 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TMEM47Q9BQJ4 181 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 FERMT1Q9BQL6 677 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 PCGF1Q9BSM1 259 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 COPS4Q9BT78 406 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 OR2B2Q9GZK3 357 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 NMUR2Q9GZQ4 415 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 WWP1Q9H0M0 922 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 MAGT1Q9H0U3 335 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 SLITRK2Q9H156 845 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 OR2AG1Q9H205 316 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 GANQ9H2C0 597 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 SLC38A1Q9H2H9 487 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 UBQLN3Q9H347 655 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 WDR55Q9H6Y2 383 aaPredicted RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 GEMIN7Q9H840 131 aaKnown RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 KAT14Q9H8E8 782 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 VIPAS39Q9H9C1 493 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 CHMP1AQ9HD42 196 aaPredicted RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 SIX2Q9NPC8 291 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 OLFML3Q9NRN5 406 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 DPP3Q9NY33 737 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 AHSPQ9NZD4 102 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 SPG21Q9NZD8 308 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 KCND2Q9NZV8 630 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 GCNT4Q9P109 453 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 EIF3KQ9UBQ5 218 aaKnown RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 SMPXQ9UHP9 88 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 MGAT4BQ9UQ53 548 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 MOB4Q9Y3A3 225 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TBL2Q9Y4P3 447 aaKnown RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 KLK4Q9Y5K2 254 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 CSAG2Q9Y5P2 127 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TOP2AP11388 1531 aaKnown RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 ARAP1Q96P48 1450 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MROH7-TTC4A0A0A0MT08 1334 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NAV1Q8NEY1 1877 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TTC37Q6PGP7 1564 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 BICRAQ9NZM4 1560 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 RTEL1-TNFRSF6BF6WH68 1400 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PSME4Q14997 1843 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 A0A1B0GVL5 298 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 A0A1W2PQL4 384 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 ILVBLA1L0T0 632 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TRABD2BA6NFA1 517 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 FABP12A6NFH5 140 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 C5orf52A6NGY3 159 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ARHGAP42A6NI28 874 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 A6NIZ1 184 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 METTL15A6NJ78 407 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 YDJCA8MPS7 323 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 HEPACAM2A8MVW5 462 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ARHGEF33A8MVX0 844 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ZNF487B1APH4 448 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NEDD8-MDP1E9PL57 170 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 LOC110117498-PIK3R3F6TDL0 507 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MKRN2OSH3BPM6 223 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SMLR1H3BR10 107 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TMEM189-UBE2V1I3L0A0 370 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 IFNL4K9M1U5 179 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 M0QZK8 103 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 VCYO14598 125 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ABCD4O14678 606 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TFECO14948 347 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 ARPC3O15145 178 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SURF4O15260 269 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 STX7O15400 261 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 ARPC5O15511 151 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OGG1O15527 345 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ST8SIA3O43173 380 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 RNF13O43567 381 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 FCMRO60667 390 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TOM1O60784 492 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 HSF2BPO75031 334 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TRMUO75648 421 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 OR7A10O76100 309 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 EDN1P05305 212 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SBK2P0C263 348 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OR52Z1P0C646 297 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NBEAP1P0C6P0 100 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GSTM3P21266 225 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A1P22309 533 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PSMB5P28074 263 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 AKT2P31751 481 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OTX1P32242 354 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 FDFT1P37268 417 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PBX3P40426 434 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NSFP46459 744 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 RGS4P49798 205 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GMPSP49915 693 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 RAB9AP51151 201 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 RAB28P51157 221 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ATP5J2P56134 94 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TMEM33P57088 247 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PTENP60484 403 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NAA20P61599 178 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms