RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 GTF2IRD2BQ6EKJ0 949 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 DLEU7Q6UYE1 221 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 GTF2IRD2Q86UP8 949 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 KIF18BQ86Y91 864 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 ZNF295-AS1Q8N0V1 137 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 GCNT2Q8N0V5 402 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 OR52P1PQ8NH57 321 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 KLHL15Q96M94 604 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 PRRG4Q9BZD6 226 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 TRIM8Q9BZR9 551 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 ARMC7Q9H6L4 198 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 TMEM185BQ9H7F4 350 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 SERINC1Q9NRX5 453 aa12.06□□□□□ -0.48
ACTN4-205ENST00000477174 MCTS1Q9ULC4 181 aaKnown RBP12.06□□□□□ -0.48
ACTN4-205ENST00000477174 INTS1Q8N201 2190 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 FAAHO00519 579 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 TNFSF11O14788 317 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 CXCL13O43927 109 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 BCAS1O75363 584 aaPredicted RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 TNFSF13O75888 250 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 BCHEP06276 602 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 THBS1P07996 1170 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 NUDT7P0C024 238 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 PABPC4LP0CB38 370 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 PRF1P14222 555 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 ADSLP30566 484 aaPredicted RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 SSTR2P30874 369 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 UQCRC1P31930 480 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 RYKP34925 604 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 APOBEC1P41238 236 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 HTR3AP46098 478 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 MERTKQ12866 999 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 SELENBP1Q13228 472 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 LARS2Q15031 903 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 RUNDC3AQ59EK9 446 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 GDF7Q7Z4P5 450 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 HMGN2P46Q86SG4 172 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 ZNF440Q8IYI8 595 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 ZNF563Q8TA94 476 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 WDR60Q8WVS4 1066 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 CNOT9Q92600 299 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 C14orf79Q96F83 325 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 ZNF317Q96PQ6 595 aaPredicted RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 CACYBPQ9HB71 228 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 GLRX2Q9NS18 164 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 DNAJB12Q9NXW2 375 aaKnown RBP12.05□□□□□ -0.48
ACTN4-205ENST00000477174 KLHL14Q9P2G3 628 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 KCNN3Q9UGI6 736 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 PACSIN3Q9UKS6 424 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 IFT52Q9Y366 437 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 ARHGAP21Q5T5U3 1957 aa12.05□□□□□ -0.48
ACTN4-205ENST00000477174 ABCA12Q86UK0 2595 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 APCP25054 2843 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 CDHR4A6H8M9 788 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 CFAP73A6NFT4 308 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 A8MXE2 369 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 EEF1E1-BLOC1S5C9J1V9 151 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 C5orf58C9J3I9 102 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 MSTNO14793 375 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 EEF1E1O43324 174 aaKnown RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 AQP8O94778 261 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 PGM3O95394 542 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 UQCRBP14927 111 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 ETS2P15036 469 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 SFTPDP35247 375 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 KIR2DL2P43627 348 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 IDH2P48735 452 aaKnown RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 PCYT1AP49585 367 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 MAP2K6P52564 334 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 RAC3P60763 192 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 PLAURQ03405 335 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 GCNT6Q5T4J0 391 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 MRPL2Q5T653 305 aaKnown RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 CGB2Q6NT52 195 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 REEP3Q6NUK4 255 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 C3orf33Q6P1S2 294 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 PLEKHM3Q6ZWE6 761 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 GRINAQ7Z429 371 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 ATP6V1C2Q8NEY4 427 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 BBS10Q8TAM1 723 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 SLC25A43Q8WUT9 341 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 MAL2Q969L2 176 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 CPNE4Q96A23 557 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 STARD4Q96DR4 205 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 REXO5Q96IC2 774 aaKnown RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 GMPPAQ96IJ6 420 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 CCDC106Q9BWC9 280 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 TMEM38AQ9H6F2 299 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 SAR1AQ9NR31 198 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 RLIMQ9NVW2 624 aa12.04□□□□□ -0.48
ACTN4-205ENST00000477174 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 SPIN1Q9Y657 262 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-205ENST00000477174 TACC2O95359 2948 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 NPPAP01160 153 aa12.03□□□□□ -0.48
ACTN4-205ENST00000477174 SHC1P29353 583 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms