RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 NANOGP8Q6NSW7 305 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 VWA1Q6PCB0 445 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 PLEKHM3Q6ZWE6 761 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 SERPINA11Q86U17 422 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 LILRA2Q8N149 483 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 METTL25Q8N6Q8 603 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 ROBO4Q8WZ75 1007 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 RCN3Q96D15 328 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 OR11A1Q9GZK7 315 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 MYLK2Q9H1R3 596 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 NANOGQ9H9S0 305 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.16□□□□□ -0.62
APTX-220ENST00000476858 AP4B1Q9Y6B7 739 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 DCHS2Q6V1P9 2916 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 HCFC1P51610 2035 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 UNC79Q9P2D8 2635 aa11.16□□□□□ -0.62
APTX-220ENST00000476858 MED12LQ86YW9 2145 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 CDHR4A6H8M9 788 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 SNX3O60493 162 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 TNFSF13O75888 250 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 OPN1SWP03999 348 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 DBIP07108 87 aaKnown RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 HOXD4P09016 255 aaPredicted RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 IL7RP16871 459 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 PTGER4P35408 488 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 GCKP35557 465 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 TIMP3P35625 211 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 IDH2P48735 452 aaKnown RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 CRISP3P54108 245 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 SUMO3P55854 103 aaPredicted RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 RAC1P63000 192 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 SIRPAP78324 504 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 CDK6Q00534 326 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 DMTNQ08495 405 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 MERTKQ12866 999 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 EPS8Q12929 822 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 CBFBQ13951 182 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 SCARB2Q14108 478 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 TRMT5Q32P41 509 aaKnown RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 TMEM176BQ3YBM2 270 aaPredicted RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 ADGRG3Q86Y34 549 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 GRAMD2AQ8IUY3 354 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 MEIOBQ8N635 442 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 ACBD4Q8NC06 268 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 TOR1AIP2Q8NFQ8 470 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 OR2V1Q8NHB1 315 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 TSPEARQ8WU66 669 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 ASB5Q8WWX0 329 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 LRRC58Q96CX6 371 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 KLHL15Q96M94 604 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 KAT8Q9H7Z6 458 aaKnown RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 BCL2L10Q9HD36 194 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 ACER3Q9NUN7 267 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 COQ3Q9NZJ6 369 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 SLC35A3Q9Y2D2 325 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 KLF2Q9Y5W3 355 aaPredicted RBP11.15□□□□□ -0.62
APTX-220ENST00000476858 CAPN7Q9Y6W3 813 aa11.15□□□□□ -0.62
APTX-220ENST00000476858 CENPEQ02224 2701 aa11.15□□□□□ -0.63
APTX-220ENST00000476858 A0A0G2JPF8 293 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 A0A1W2PNV4 684 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 ZC3H12DA2A288 527 aaKnown RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 GMNCA6NCL1 334 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 SLC22A20A6NK97 555 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 CCT8L1PA6NM43 557 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 HNRNPCL2B2RXH8 293 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 ZNF814B7Z6K7 855 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 HNRNPCL3B7ZW38 293 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 LCE2BO14633 110 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 ADAMDEC1O15204 470 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 TPST2O60704 377 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 HNRNPCL1O60812 293 aaKnown RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 RCBTB2O95199 551 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 PABPC4LP0CB38 370 aaKnown RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 HNRNPCL4P0DMR1 293 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 TMIGD3P0DMS9 266 aaPredicted RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 COX4I1P13073 169 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 IGFBP2P18065 325 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 EDNRAP25101 427 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 MAGEA8P43361 318 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 KIR2DL2P43627 348 aaPredicted RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 ANXA11P50995 505 aaKnown RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 TXNL4AP83876 142 aaKnown RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 BNIP2Q12982 314 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 HBMQ6B0K9 141 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 PPP4R4Q6NUP7 873 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 NET1Q7Z628 596 aaPredicted RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 CALHM3Q86XJ0 350 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 PEX5LQ8IYB4 626 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 ZNF295-AS1Q8N0V1 137 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 EID3Q8N140 333 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 SMYD1Q8NB12 490 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 GPR32P1Q8NGA4 272 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 OR4D11Q8NGI4 311 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 OSTF1Q92882 214 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 ARL5BQ96KC2 179 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 MRGPRX4Q96LA9 322 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms