RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 METTL25Q8N6Q8 603 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 RELL2Q8NC24 303 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-208ENST00000476739 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 OR10A6Q8NH74 314 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-208ENST00000476739 CA5BP1Q8WTZ4 195 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 OIT3Q8WWZ8 545 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 LRRC58Q96CX6 371 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 RCN3Q96D15 328 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 ADGRG7Q96K78 797 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 PINK1Q9BXM7 581 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 PIF1Q9H611 641 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 TMEM38AQ9H6F2 299 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 KAT8Q9H7Z6 458 aaKnown RBP8.72□□□□□ -1.01
HDAC3-208ENST00000476739 NANOGQ9H9S0 305 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 CALHM2Q9HA72 323 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 HHATLQ9HCP6 504 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 THUMPD1Q9NXG2 353 aaKnown RBP8.72□□□□□ -1.01
HDAC3-208ENST00000476739 COQ3Q9NZJ6 369 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 CALML5Q9NZT1 146 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 GMPR2Q9P2T1 348 aaKnown RBP8.72□□□□□ -1.01
HDAC3-208ENST00000476739 USP22Q9UPT9 525 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 GPC6Q9Y625 555 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-208ENST00000476739 AP4B1Q9Y6B7 739 aa8.72□□□□□ -1.01
HDAC3-208ENST00000476739 INTS1Q8N201 2190 aaKnown RBP8.71□□□□□ -1.01
HDAC3-208ENST00000476739 CDHR4A6H8M9 788 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 TMEM247A6NEH6 219 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 BBIP1A8MTZ0 92 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 C5orf58C9J3I9 102 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 TNFSF11O14788 317 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 ADAMDEC1O15204 470 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 SLC22A2O15244 555 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 FRS3O43559 492 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 TPST1O60507 370 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 CCDC22O60826 627 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 COX4I1P13073 169 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 GP1BBP13224 206 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 PRG2P13727 222 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 ADH6P28332 368 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 HTR1EP28566 365 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 CHRNB4P30926 498 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 SFTPDP35247 375 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 EIF1P41567 113 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 ACAA2P42765 397 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 IDH2P48735 452 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 HOXC5Q00444 222 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 EPS8Q12929 822 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 ART3Q13508 389 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 MAPRE2Q15555 327 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 LIN52Q52LA3 116 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 COQ5Q5HYK3 327 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF311Q5JNZ3 666 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 PRAMEF8Q5VWM4 474 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 PRAMEF7Q5VXH5 474 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 REEP3Q6NUK4 255 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 PLEKHM3Q6ZWE6 761 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 NET1Q7Z628 596 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 GCNT2Q8N0V5 402 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 MEIOBQ8N635 442 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 OR10D3Q8NH80 312 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 LILRB4Q8NHJ6 448 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 RP9Q8TA86 221 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF563Q8TA94 476 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 BBS10Q8TAM1 723 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 PMM1Q92871 262 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 MRGPRX4Q96LA9 322 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 WFDC6Q9BQY6 131 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 NSRP1Q9H0G5 558 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 COQ10BQ9H8M1 238 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 EXOSC3Q9NQT5 275 aaKnown RBP8.71□□□□□ -1.02
HDAC3-208ENST00000476739 CTPS2Q9NRF8 586 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 CORO2BQ9UQ03 480 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 HCFC1P51610 2035 aa8.71□□□□□ -1.02
HDAC3-208ENST00000476739 A0A1W2PNR3 127 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 HSPB2A8KAH6 182 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 CXCL13O43927 109 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 AQP8O94778 261 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 RCBTB2O95199 551 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 IL2RAP01589 272 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 OPN1SWP03999 348 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 THBS1P07996 1170 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 ETS2P15036 469 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 PGCP20142 388 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 KLK2P20151 261 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 BMP5P22003 454 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 SLC6A2P23975 617 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 SLC6A8P48029 635 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 DLX5P56178 289 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 PCBP3P57721 371 aaKnown RBP8.7□□□□□ -1.02
HDAC3-208ENST00000476739 TFF3Q07654 80 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 MERTKQ12866 999 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 GNA13Q14344 377 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 PON3Q15166 354 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 HSPB2Q16082 182 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 SNCBQ16143 134 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 CYP51A1Q16850 503 aa8.7□□□□□ -1.02
HDAC3-208ENST00000476739 TMEM176BQ3YBM2 270 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms