RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ARL8AQ96BM9 186 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 ROPN1LQ96C74 230 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 PIP5K1AQ99755 562 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 SLC35A5Q9BS91 424 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 WDR55Q9H6Y2 383 aaPredicted RBP9.62□□□□□ -0.87
SEC13-214ENST00000476597 AIG1Q9NVV5 245 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 MARCOQ9UEW3 520 aaPredicted RBP9.62□□□□□ -0.87
SEC13-214ENST00000476597 WDR45Q9Y484 360 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 GPR45Q9Y5Y3 372 aa9.62□□□□□ -0.87
SEC13-214ENST00000476597 NUP214P35658 2090 aaPredicted RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 A0A1W2PNR3 127 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 CCDC154A6NI56 674 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 TRPC5OSA6NMA1 111 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 SLCO1B7G3V0H7 640 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 HMGN4O00479 90 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 GCM2O75603 506 aaPredicted RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 CYP7B1O75881 506 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 H6PDO95479 791 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 C1QCP02747 245 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 PGRP06401 933 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 UBTFL6P0CB48 400 aaPredicted RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 PGCP20142 388 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 FPR1P21462 350 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 EPHA3P29320 983 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 CCR4P51679 360 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 NKX6-1P78426 367 aaPredicted RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 KCNJ10P78508 379 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 CHRNEQ04844 493 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 FUT5Q11128 374 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 BEX5Q5H9J7 111 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 PLEKHM3Q6ZWE6 761 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 GABRG1Q8N1C3 465 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 LRRC75A-AS1Q8N1F1 130 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 GLB1L3Q8NCI6 653 aaPredicted RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 FAM71CQ8NEG0 241 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 TMEM234Q8WY98 164 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 PIGTQ969N2 578 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 HDHD5Q9BXW7 423 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 QRSL1Q9H0R6 528 aaKnown RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 BCO1Q9HAY6 547 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 SERINC1Q9NRX5 453 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 ACER3Q9NUN7 267 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 KLHL13Q9P2N7 655 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 ING1Q9UK53 422 aaPredicted RBP9.61□□□□□ -0.87
SEC13-214ENST00000476597 SLC35A3Q9Y2D2 325 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 ROS1P08922 2347 aa9.61□□□□□ -0.87
SEC13-214ENST00000476597 IGHV3-15A0A0B4J1V0 119 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 GOLGA8QA0A0J9YX86 632 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 GOLGA8OA6NCC3 632 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 ZNF814B7Z6K7 855 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 C9JVG2 144 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 GOLGA8NF8WBI6 632 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 BCAS1O75363 584 aaPredicted RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 SLC7A1P30825 629 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 CHI3L1P36222 383 aaPredicted RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 APOBEC1P41238 236 aaKnown RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 KHKP50053 298 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 MAGOHP61326 146 aaKnown RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 TXNL4AP83876 142 aaKnown RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 LRRC74AQ0VAA2 488 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 MERTKQ12866 999 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 SYPL1Q16563 259 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 BEND6Q5SZJ8 279 aaPredicted RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 SHEQ5VZ18 495 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 C3orf33Q6P1S2 294 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 TFAP2EQ6VUC0 442 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 ZNF621Q6ZSS3 439 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 TMPPEQ6ZT21 453 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 RNF130Q86XS8 419 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 ZNF619Q8N2I2 560 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 TRIML2Q8N7C3 387 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 STEAP2Q8NFT2 490 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 RAB3IL1Q8TBN0 382 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 MGARPQ8TDB4 240 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 TLCD1Q96CP7 247 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 MAELQ96JY0 434 aaKnown RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 TRNT1Q96Q11 434 aaKnown RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 OR52E6Q96RD3 313 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 PANX1Q96RD7 426 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 TACO1Q9BSH4 297 aaKnown RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 INPP5KQ9BT40 448 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 CCDC106Q9BWC9 280 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 ACTR6Q9GZN1 396 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 MANSC1Q9H8J5 431 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.6□□□□□ -0.87
SEC13-214ENST00000476597 LIPT1Q9Y234 373 aa9.6□□□□□ -0.87
SEC13-214ENST00000476597 ZANQ9Y493 2812 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 CLDN24A6NM45 220 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 SMAD9O15198 467 aaKnown RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 CYTIPO60759 359 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 DIAPH2O60879 1101 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms