RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 WDR60Q8WVS4 1066 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 STARD4Q96DR4 205 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 ADGRG7Q96K78 797 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 MARK4Q96L34 752 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 OR52B2Q96RD2 323 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 GPATCH1Q9BRR8 931 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 MTHFD2LQ9H903 347 aaPredicted RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 TPT1P8Q9HAU6 139 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 KLHL9Q9P2J3 617 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 CORO2BQ9UQ03 480 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 MED12LQ86YW9 2145 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 TACC2O95359 2948 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 A0A0J9YW62 118 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 C9JVG2 144 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 PRKD3O94806 890 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 GSNP06396 782 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 H2AFXP16104 143 aaPredicted RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 IL11P20809 199 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 ENPP1P22413 925 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 DNASE1P24855 282 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 PGM1P36871 562 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 CLK1P49759 484 aaKnown RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 ATP4BP51164 291 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 AQP5P55064 265 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 DSTNP60981 165 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 COPZ1P61923 177 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 CHRNEQ04844 493 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 FADDQ13158 208 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 SNTB1Q13884 538 aaKnown RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 LARS2Q15031 903 aaKnown RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 CTU2Q2VPK5 515 aaKnown RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 PLXDC2Q6UX71 529 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 DNAJC14Q6Y2X3 702 aaPredicted RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 FCRLAQ7L513 359 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 GRINAQ7Z429 371 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 BTLAQ7Z6A9 289 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 FAM71CQ8NEG0 241 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 ATP6V1C2Q8NEY4 427 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 LINC01560Q8TB33 94 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 PNPT1Q8TCS8 783 aaKnown RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 RNF128Q8TEB7 428 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 STON2Q8WXE9 905 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 MAGEB18Q96M61 343 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 USB1Q9BQ65 265 aaKnown RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 INPP5KQ9BT40 448 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 OPN3Q9H1Y3 402 aaPredicted RBP9.15□□□□□ -0.94
CCM2-208ENST00000476594 PLSCR4Q9NRQ2 329 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 ACER3Q9NUN7 267 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 EMC3Q9P0I2 261 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 ZNF232Q9UNY5 417 aa9.15□□□□□ -0.94
CCM2-208ENST00000476594 FBN2P35556 2912 aa9.15□□□□□ -0.95
CCM2-208ENST00000476594 KIAA1549Q9HCM3 1950 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 A0A0G2JPF8 293 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 FAM221AA4D161 298 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 AGAP5A6NIR3 686 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HNRNPCL2B2RXH8 293 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HNRNPCL3B7ZW38 293 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 C5orf58C9J3I9 102 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 OIP5O43482 229 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 DNPH1O43598 174 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HNRNPCL1O60812 293 aaKnown RBP9.14□□□□□ -0.95
CCM2-208ENST00000476594 DNAJA2O60884 412 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 AQP8O94778 261 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 OPN1LWP04000 364 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HNRNPCL4P0DMR1 293 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 TFPIP10646 304 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 NID1P14543 1247 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 RYKP34925 604 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 CDKN2CP42773 168 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 IDH3AP50213 366 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 RNF144AP50876 292 aaPredicted RBP9.14□□□□□ -0.95
CCM2-208ENST00000476594 SESN3P58005 492 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 KRTAP10-9P60411 292 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 SQLEQ14534 574 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 GUSBP1Q15486 140 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 TOMM34Q15785 309 aaPredicted RBP9.14□□□□□ -0.95
CCM2-208ENST00000476594 SYPL1Q16563 259 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 EXOC3L2Q2M3D2 409 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 NDUFAF6Q330K2 333 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HSP90B2PQ58FF3 399 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 SYT14P1Q58G82 188 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 PRAMEF8Q5VWM4 474 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 PRAMEF7Q5VXH5 474 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 PLEKHM3Q6ZWE6 761 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 MAVSQ7Z434 540 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 CKAP2Q8WWK9 683 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 DDIT4LQ96D03 193 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 OR5B2Q96R09 309 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HDHD5Q9BXW7 423 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 KLHL4Q9C0H6 718 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 OR10A4Q9H209 315 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 SLC38A1Q9H2H9 487 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 SLCO1B3Q9NPD5 702 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 KLHL13Q9P2N7 655 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 CHRNA9Q9UGM1 479 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 IFT52Q9Y366 437 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 HDGFL3Q9Y3E1 203 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 TESMINQ9Y4I5 508 aa9.14□□□□□ -0.95
CCM2-208ENST00000476594 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms