RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SELENBP1Q13228 472 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 DAZAP2Q15038 168 aaPredicted RBP18.93■□□□□ 0.62
LIME1-204ENST00000476183 PDSS1Q5T2R2 415 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 CDH24Q86UP0 819 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 ZNF610Q8N9Z0 462 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 ROBO4Q8WZ75 1007 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 ST8SIA1Q92185 356 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 CNOT9Q92600 299 aaKnown RBP18.93■□□□□ 0.62
LIME1-204ENST00000476183 THOC1Q96FV9 657 aaKnown RBP18.93■□□□□ 0.62
LIME1-204ENST00000476183 SLC52A3Q9NQ40 469 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 RASSF1Q9NS23 344 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.93■□□□□ 0.62
LIME1-204ENST00000476183 DNAJB12Q9NXW2 375 aaKnown RBP18.93■□□□□ 0.62
LIME1-204ENST00000476183 PCDHB14Q9Y5E9 798 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 ENO4A6NNW6 628 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 SS18L1O75177 396 aaPredicted RBP18.92■□□□□ 0.62
LIME1-204ENST00000476183 CD8BP10966 210 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 PGCP20142 388 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 RPS4Y1P22090 263 aaKnown RBP18.92■□□□□ 0.62
LIME1-204ENST00000476183 CRATP43155 626 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 MAGEA8P43361 318 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 ZNF239Q16600 458 aaKnown RBP18.92■□□□□ 0.62
LIME1-204ENST00000476183 BLOC1S3Q6QNY0 202 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 PLEKHM3Q6ZWE6 761 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 LSRQ86X29 649 aaPredicted RBP18.92■□□□□ 0.62
LIME1-204ENST00000476183 GMPPAQ96IJ6 420 aaPredicted RBP18.92■□□□□ 0.62
LIME1-204ENST00000476183 ACER3Q9NUN7 267 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 ZNF446Q9NWS9 450 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 PROCRQ9UNN8 238 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 CELSR1Q9NYQ6 3014 aa18.92■□□□□ 0.62
LIME1-204ENST00000476183 A0A1W2PNR3 127 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 GJE1A6NN92 205 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 RYKP34925 604 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 CD79BP40259 229 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 MERTKQ12866 999 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 POLDIP3Q9BY77 421 aaKnown RBP18.91■□□□□ 0.62
LIME1-204ENST00000476183 MTHFD2LQ9H903 347 aaPredicted RBP18.91■□□□□ 0.62
LIME1-204ENST00000476183 EXOSC3Q9NQT5 275 aaKnown RBP18.91■□□□□ 0.62
LIME1-204ENST00000476183 CCDC167Q9P0B6 97 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 SLAMF8Q9P0V8 285 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 P2RX2Q9UBL9 471 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 EMC9Q9Y3B6 208 aa18.91■□□□□ 0.62
LIME1-204ENST00000476183 SH3D21A4FU49 640 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 NR5A2O00482 541 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 PLGP00747 810 aaPredicted RBP18.9■□□□□ 0.62
LIME1-204ENST00000476183 TFPTP0C1Z6 253 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 CCKARP32238 428 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 DSTNP60981 165 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 MSRB3Q8IXL7 192 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 ARFGAP2Q8N6H7 521 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 OR6K3Q8NGY3 331 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 RNF128Q8TEB7 428 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 ABHD3Q8WU67 409 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 SLC38A5Q8WUX1 472 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 WDR60Q8WVS4 1066 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 TMEM234Q8WY98 164 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 CPNE4Q96A23 557 aaPredicted RBP18.9■□□□□ 0.62
LIME1-204ENST00000476183 SPDL1Q96EA4 605 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 DACH2Q96NX9 599 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 CCDC106Q9BWC9 280 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 CLEC4MQ9H2X3 399 aaPredicted RBP18.9■□□□□ 0.62
LIME1-204ENST00000476183 TIGARQ9NQ88 270 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 PLSCR4Q9NRQ2 329 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 SLC25A37Q9NYZ2 338 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 DSPPQ9NZW4 1301 aa18.9■□□□□ 0.62
LIME1-204ENST00000476183 TEP1Q99973 2627 aaKnown RBP18.89■□□□□ 0.62
LIME1-204ENST00000476183 A0A096LPI6 279 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 AP3D1O14617 1153 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 EDF1O60869 148 aaKnown RBP18.89■□□□□ 0.61
LIME1-204ENST00000476183 BCHEP06276 602 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 NUDT7P0C024 238 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 KLK2P20151 261 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 PCYT1AP49585 367 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 ATP4BP51164 291 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 CTBP2P56545 445 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 AGKQ53H12 422 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 RPS26P11Q5JNZ5 115 aaPredicted RBP18.89■□□□□ 0.61
LIME1-204ENST00000476183 PAGE3Q5JUK9 113 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 C3orf33Q6P1S2 294 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 CMIPQ8IY22 773 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 ZNF563Q8TA94 476 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 PMM1Q92871 262 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 CTPS2Q9NRF8 586 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 GLRX2Q9NS18 164 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 ITGB1BP2Q9UKP3 347 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 TESMINQ9Y4I5 508 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 FREM1Q5H8C1 2179 aa18.89■□□□□ 0.61
LIME1-204ENST00000476183 IGHV3-15A0A0B4J1V0 119 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 CLIC1O00299 241 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 DBIP07108 87 aaKnown RBP18.88■□□□□ 0.61
LIME1-204ENST00000476183 POU2F1P14859 743 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 IL7RP16871 459 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 ENPP1P22413 925 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 AGTR1P30556 359 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 SLC7A1P30825 629 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 RAC3P60763 192 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 SQLEQ14534 574 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 RGNQ15493 299 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 LRIF1Q5T3J3 769 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 MRPL2Q5T653 305 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms