RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 GGNQ86UU5 652 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 C9orf106Q8NAJ2 232 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 PCYOX1LQ8NBM8 494 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 SLC25A43Q8WUT9 341 aaPredicted RBP13□□□□□ -0.33
ABCF3-211ENST00000475728 CNOT9Q92600 299 aaKnown RBP13□□□□□ -0.33
ABCF3-211ENST00000475728 PRRG4Q9BZD6 226 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 GID8Q9NWU2 228 aa13□□□□□ -0.33
ABCF3-211ENST00000475728 DNAJB12Q9NXW2 375 aaKnown RBP13□□□□□ -0.33
ABCF3-211ENST00000475728 CDHR4A6H8M9 788 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 KDM4EB2RXH2 506 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 PGM3O95394 542 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 NUDT7P0C024 238 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 PABPC4LP0CB38 370 aaKnown RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 BMP5P22003 454 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 COL8A1P27658 744 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 SLC7A1P30825 629 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 LSP1P33241 339 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 RYKP34925 604 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 APOBEC1P41238 236 aaKnown RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 ASCL1P50553 236 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF136P52737 540 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 DLX5P56178 289 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 CARD18P57730 90 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 CDK6Q00534 326 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 MERTKQ12866 999 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 PON3Q15166 354 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 CDSNQ15517 529 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 CYP51A1Q16850 503 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF550Q7Z398 422 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 GRINAQ7Z429 371 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 HMGN2P46Q86SG4 172 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 RETREG3Q86VR2 466 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 SLC30A8Q8IWU4 369 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 C11orf65Q8NCR3 313 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 NAXEQ8NCW5 288 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 HIPK4Q8NE63 616 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 SLC35B4Q969S0 331 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 REXO5Q96IC2 774 aaKnown RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF607Q96SK3 696 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 SPOCK3Q9BQ16 436 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 KLHDC3Q9BQ90 382 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 SPATA9Q9BWV2 254 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 PIGMQ9H3S5 423 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 TMEM185BQ9H7F4 350 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 FOXD3Q9UJU5 478 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 ANGPT4Q9Y264 503 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF443Q9Y2A4 671 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-211ENST00000475728 CENPEQ02224 2701 aa12.99□□□□□ -0.33
ABCF3-211ENST00000475728 CACNA1DQ01668 2161 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 MED12Q93074 2177 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 GMNCA6NCL1 334 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 NKX2-6A6NCS4 301 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 PRORSD1PA6NEY8 169 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 CLDN24A6NM45 220 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 H0YC42 278 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 MRASO14807 208 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 SERPINB7O75635 380 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 TGM6O95932 706 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 CD1EP15812 388 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 GRNP28799 593 aaKnown RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 SFTPDP35247 375 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 MAP2K6P52564 334 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 TPD52P55327 224 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 COPZ1P61923 177 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 SCARB2Q14108 478 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 TMEM176BQ3YBM2 270 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 FBXL19-AS1Q494R0 122 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF311Q5JNZ3 666 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 RPS26P11Q5JNZ5 115 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 PLEKHM3Q6ZWE6 761 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 SNX32Q86XE0 403 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 VRK2Q86Y07 508 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 LIX1LQ8IVB5 337 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 NFKBIDQ8NI38 313 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 RP9Q8TA86 221 aaKnown RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 FNDC9Q8TBE3 224 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 MAL2Q969L2 176 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 CPNE4Q96A23 557 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 INTS12Q96CB8 462 aaKnown RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 ADGRG7Q96K78 797 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 NPAS1Q99742 590 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 ELAC2Q9BQ52 826 aaKnown RBP12.98□□□□□ -0.33
ABCF3-211ENST00000475728 IKZF5Q9H5V7 419 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 GLRX2Q9NS18 164 aa12.98□□□□□ -0.33
ABCF3-211ENST00000475728 A0A0J9YW62 118 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 FBP2O00757 339 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 TNFSF11O14788 317 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 CXCL13O43927 109 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 PRKAR1BP31321 381 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 SLC1A3P43003 542 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 IDH2P48735 452 aaKnown RBP12.97□□□□□ -0.33
ABCF3-211ENST00000475728 CLK1P49759 484 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms