RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SPDEFO95238 335 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 RAB3DO95716 219 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 TSPAN12O95859 305 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 C6P13671 934 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 TPT1P13693 172 aaKnown RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 GZMMP51124 257 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 NFATC4Q14934 902 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 HIST2H3PS2Q5TEC6 136 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 ATG9BQ674R7 924 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 IL22RA1Q8N6P7 574 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 OR9A1PQ8NGU1 263 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 OR4K15Q8NH41 348 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 FNDC9Q8TBE3 224 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 DCUN1D4Q92564 292 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 PCYT2Q99447 389 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 MARVELD1Q9BSK0 173 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 MINDY3Q9H8M7 445 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 TXNL4BQ9NX01 149 aaKnown RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 TSPAN6O43657 245 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 MMP20O60882 483 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 MPC2O95563 127 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 HEXBP07686 556 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 FDXRP22570 491 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 UQCRC2P22695 453 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CSKP41240 450 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 GDF5P43026 501 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 RPL34P49207 117 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 MELKQ14680 651 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 SLC10A6Q3KNW5 377 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 KIAA1211LQ6NV74 962 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 GKN2Q86XP6 184 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 OR9A4Q8NGU2 314 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 GABARAPL3Q9BY60 117 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 NSUN3Q9H649 340 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 KCNK6Q9Y257 313 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 KCNMB2Q9Y691 235 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CFAP20Q9Y6A4 193 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 PRRC2BQ5JSZ5 2229 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 NAP1L6A6NFF2 107 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 KIAA0355O15063 1070 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 AK1P00568 194 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 OR1E2P47887 323 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 THBS3P49746 956 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 HTR6P50406 440 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 FKBP1AP62942 108 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 PDLIM3Q53GG5 364 aaPredicted RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF776Q68DI1 518 aaPredicted RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CALHM3Q86XJ0 350 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ST7LQ8TDW4 575 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 MMABQ96EY8 250 aaPredicted RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 LRR1Q96L50 414 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF75AQ96N20 296 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 MCOLN1Q9GZU1 580 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 SMCO4Q9NRQ5 59 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ASB1Q9Y576 335 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 SBF1O95248 1867 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ANKRD66B4E2M5 251 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ZP3P21754 424 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 PBX2P40425 430 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 SOX3P41225 446 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 P2RX1P51575 399 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ARSDP51689 593 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 NFATC2Q13469 925 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 TPGS2Q68CL5 300 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 TFAP2EQ6VUC0 442 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 NRROSQ86YC3 692 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF440Q8IYI8 595 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CCDC116Q8IYX3 515 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF610Q8N9Z0 462 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 B3GNT7Q8NFL0 401 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 SETD7Q8WTS6 366 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CHTF18Q8WVB6 975 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CHFRQ96EP1 664 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 SHDQ96IW2 340 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 FAM83CQ9BQN1 747 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 B3GALT1Q9Y5Z6 326 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 TSC2P49815 1807 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 UNC119BA6NIH7 251 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 VSTM2BA6NLU5 285 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 GBAP04062 536 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 GALTP07902 379 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 DLX2Q07687 328 aaPredicted RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 EIF4HQ15056 248 aaKnown RBP10.82□□□□□ -0.68
U2AF1-209ENST00000475639 RANBP10Q6VN20 620 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 OR5D16Q8NGK9 328 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 OR6M1Q8NGM8 313 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 OR1J4Q8NGS1 313 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 CREB3L4Q8TEY5 395 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 FZD8Q9H461 694 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 C2orf42Q9NWW7 574 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 COPS3Q9UNS2 423 aa10.82□□□□□ -0.68
U2AF1-209ENST00000475639 LOC102723532A0A0G2JNH3 316 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 UPK3BL1B0FP48 263 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 UPK3BL2E5RIL1 263 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 NPC1O15118 1278 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 LATO43561 262 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CFDP00746 253 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SERPINA5P05154 406 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms