RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SHC1P29353 583 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 PRKAR1BP31321 381 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 KDELR2P33947 212 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 RYKP34925 604 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 KCNJ5P48544 419 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 STARP49675 285 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 LHX2P50458 406 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 P2RX1P51575 399 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 MNAT1P51948 309 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ART1P52961 327 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 TPD52P55327 224 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 DSCR4P56555 118 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 SESN3P58005 492 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 MS4A2Q01362 244 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 CRYZQ08257 329 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 EPS8Q12929 822 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 GNA13Q14344 377 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 NPTX1Q15818 432 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 KRTCAP3Q53RY4 240 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 SLC25A53Q5H9E4 307 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 NHSL2Q5HYW2 709 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF311Q5JNZ3 666 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 VASNQ6EMK4 673 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 PGM2L1Q6PCE3 622 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 Q71RC1 249 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 TSEN54Q7Z6J9 526 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 RBM45Q8IUH3 476 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ARMC8Q8IUR7 673 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 MISPQ8IVT2 679 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 PEX5LQ8IYB4 626 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 GTPBP8Q8N3Z3 284 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 FAM86B1Q8N7N1 296 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 FAM98AQ8NCA5 519 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ST6GALNAC3Q8NDV1 305 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 TOR1AIP2Q8NFQ8 470 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 OR5W2Q8NH69 310 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 NEIL3Q8TAT5 605 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 TIMP4Q99727 224 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ARHGDIGQ99819 225 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 UGT2B28Q9BY64 529 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 PCDHAC1Q9H158 963 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 C1orf21Q9H246 121 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 EXOSC3Q9NQT5 275 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 SDHAF3Q9NRP4 125 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 AGPAT4Q9NRZ5 378 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 TAS2R10Q9NYW0 307 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ADA2Q9NZK5 511 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 SEC14L3Q9UDX4 400 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 EGFL7Q9UHF1 273 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ANGPT4Q9Y264 503 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 VDAC3Q9Y277 283 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 SLC35A3Q9Y2D2 325 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 RPH3AQ9Y2J0 694 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 AP3M1Q9Y2T2 418 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 IFT52Q9Y366 437 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF337Q9Y3M9 751 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 CADP27708 2225 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 TRGV5A0A0B4J1U4 118 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 C7orf72A4D263 438 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 TMEM247A6NEH6 219 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 H3BNH8 94 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 M0R3H8 397 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 ACOT7O00154 380 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 SYT5O00445 386 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 FAAHO00519 579 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CXCR6O00574 342 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 AQP7O14520 342 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CYP7B1O75881 506 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 PDE5AO76074 875 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 LYPD3O95274 346 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 LGI1O95970 557 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 THY1P04216 161 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 COX6B1P14854 86 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 HK1P19367 917 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 TCN1P20061 433 aaPredicted RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 TNFRSF1BP20333 461 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 HTR1EP28566 365 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CLK3P49761 638 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CCR4P51679 360 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 SUCLG1P53597 346 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 SUMO3P55854 103 aaPredicted RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CLDN18P56856 261 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CLDN20P56880 219 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 NCALDP61601 193 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 LTBQ06643 244 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 FOXF1Q12946 379 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 ELOAQ14241 798 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 LARS2Q15031 903 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 QPRTQ15274 297 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 C3AR1Q16581 482 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 NRF1Q16656 503 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 GLYR1Q49A26 553 aaPredicted RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 IQCCQ4KMZ1 466 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 LIN52Q52LA3 116 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CYBRD1Q53TN4 286 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 SAMD4BQ5PRF9 694 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms