RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	U2AF2	P26368	475 aa	Known RBP eCLIP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	DLST	P36957	453 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	MEOX2	P50222	304 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	EMD	P50402	254 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	NAPA	P54920	295 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	LIM2	P55344	173 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ASAH1	Q13510	395 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	SERTAD2	Q14140	314 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	CYP51A1	Q16850	503 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	IMMT	Q16891	758 aa	Known RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	GSG1	Q2KHT4	349 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	GLYR1	Q49A26	553 aa	Predicted RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	FAM74A3	Q4VXF1	159 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	FAM120AOS	Q5T036	256 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	PVRIG	Q6DKI7	326 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ASPHD2	Q6ICH7	369 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	AFTPH	Q6ULP2	937 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	FAM43B	Q6ZT52	329 aa	Predicted RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF573	Q86YE8	665 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	GRAMD2A	Q8IUY3	354 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	MCOLN2	Q8IZK6	566 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	GPR137C	Q8N3F9	429 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	CCDC26	Q8TAB7	109 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	NANP	Q8TBE9	248 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	M1AP	Q8TC57	530 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ARNTL2	Q8WYA1	636 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	C18orf25	Q96B23	403 aa	Predicted RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	TMEM80	Q96HE8	168 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	CNOT6L	Q96LI5	555 aa	Known RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	CASD1	Q96PB1	797 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	DPH7	Q9BTV6	452 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF416	Q9BWM5	594 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	NFKBIZ	Q9BYH8	718 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	ELOVL4	Q9GZR5	314 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	POLR3F	Q9H1D9	316 aa	Predicted RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	SUDS3	Q9H7L9	328 aa	Predicted RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	PNO1	Q9NRX1	252 aa	Known RBP	2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	TNFRSF19	Q9NS68	423 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	RDH8	Q9NYR8	311 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	VSIG4	Q9Y279	399 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	MON2	Q7Z3U7	1717 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	MAP3K15	Q6ZN16	1313 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	KIF20B	Q96Q89	1820 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	PALLD	Q8WX93	1383 aa		2.58	□□□□□ -2
TMEM50B-208	ENST00000474272	SETD1A	O15047	1707 aa	Known RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	AKAP12	Q02952	1782 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	SAGE2P	A6NJ88	616 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	NUDT21	O43809	227 aa	Known RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	JAK2	O60674	1132 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	STX11	O75558	287 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	NOL4	O94818	638 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	H2AFZ	P0C0S5	128 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	BCKDHA	P12694	445 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	ACAA2	P42765	397 aa	Known RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	NOVA1	P51513	510 aa	Known RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	RND3	P61587	244 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	TIMM10	P62072	90 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	MYL5	Q02045	173 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	TRDN	Q13061	729 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF154	Q13106	437 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	STK38	Q15208	465 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	TTC31	Q49AM3	519 aa	Predicted RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	CELF3	Q5SZQ8	465 aa	Known RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	SLC22A10	Q63ZE4	541 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	SULT1C3	Q6IMI6	304 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	FAM173B	Q6P4H8	233 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	LRRC8B	Q6P9F7	803 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	LANCL3	Q6ZV70	420 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	ANKRD37	Q7Z713	158 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF589	Q86UQ0	364 aa	Predicted RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	IFNE	Q86WN2	208 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	VSTM4	Q8IW00	320 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	CSNK1A1L	Q8N752	337 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF525	Q8N782	197 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	CEP112	Q8N8E3	955 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	FADS6	Q8N9I5	356 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	MNS1	Q8NEH6	495 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	C8orf76	Q96K31	380 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	C4orf36	Q96KX1	117 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	C16orf45	Q96MC5	204 aa	Predicted RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	OR5M11	Q96RB7	305 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	PANX2	Q96RD6	677 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	FEM1A	Q9BSK4	669 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	GSDMC	Q9BYG8	508 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	RHOJ	Q9H4E5	214 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	DHX33	Q9H6R0	707 aa	Known RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	WDR76	Q9H967	626 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	POLD4	Q9HCU8	107 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	DPM3	Q9P2X0	92 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	B4GALT7	Q9UBV7	327 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	CYTH4	Q9UIA0	394 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	ANAPC7	Q9UJX3	599 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	L3MBTL1	Q9Y468	752 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	GMPPB	Q9Y5P6	360 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	CARMIL3	Q8ND23	1372 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	NWD1	Q149M9	1564 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	MED1	Q15648	1581 aa	Predicted RBP	2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	RIMBP3C	A6NJZ7	1639 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	RIMBP3B	A6NNM3	1639 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms