RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CLNS1AP54105 237 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GEMP55040 296 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CSE1LP55060 971 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 AQP5P55064 265 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CDKN2DP55273 166 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CDH4P55283 916 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TPD52P55327 224 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 XGP55808 180 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RAB10P61026 200 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CSNK2BP67870 215 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ELF3P78545 371 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NTHL1P78549 312 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 IGLV3-21P80748 117 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 XIAPP98170 497 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 IL9RQ01113 521 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SEMG2Q02383 582 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GNA12Q03113 381 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ACVR1Q04771 509 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SULT2A1Q06520 285 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF33AQ06730 810 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 IL10RBQ08334 325 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CDH17Q12864 832 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BNIP1Q12981 228 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PRKG2Q13237 762 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BTG3Q14201 252 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RCN2Q14257 317 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF235Q14590 738 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 HERC3Q15034 1050 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CYTH1Q15438 398 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR4D1Q15615 310 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CHI3L2Q15782 390 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF77Q15935 545 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CDKN3Q16667 212 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 Q1RN00 199 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TYSND1Q2T9J0 566 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PARP15Q460N3 678 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FUT11Q495W5 492 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TTC31Q49AM3 519 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FBXO48Q5FWF7 155 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC73Q5JTD7 316 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CTSL3PQ5NE16 218 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TCHHL1Q5QJ38 904 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PPM1LQ5SGD2 360 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 UTF1Q5T230 341 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SPOUT1Q5T280 376 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ARMC12Q5T9G4 340 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 HHATQ5VTY9 493 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PLPP4Q5VZY2 271 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FAM91A1Q658Y4 838 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TPGS2Q68CL5 300 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM215Q68D42 235 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PDPK2PQ6A1A2 396 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF470Q6ECI4 717 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CYB5D1Q6P9G0 228 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TEX38Q6PEX7 206 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CNSTQ6PJW8 725 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FIGLAQ6QHK4 219 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 C4orf22Q6V702 233 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZYG11AQ6WRX3 759 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TIFABQ6ZNK6 161 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RFLNAQ6ZTI6 216 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC121Q6ZUS5 278 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RPS27LQ71UM5 84 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BZW1Q7L1Q6 419 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PID1Q7Z2X4 250 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TIPARPQ7Z3E1 657 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DNAJB7Q7Z6W7 309 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CROCCP2Q86T23 111 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BBS7Q8IWZ6 715 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MCEMP1Q8IX19 187 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PIANPQ8IYJ0 282 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 APCDD1Q8J025 514 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LGI2Q8N0V4 545 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TAGAPQ8N103 731 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NDUFAF2Q8N183 169 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ARHGAP24Q8N264 748 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ARHGAP18Q8N392 663 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FBXO39Q8N4B4 442 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TTC30BQ8N4P2 665 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ATP6V0D2Q8N8Y2 350 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GPATCH11Q8N954 259 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SNX31Q8N9S9 440 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DNAAF3Q8N9W5 541 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC63Q8NA47 563 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DCAF4L2Q8NA75 395 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LPCAT1Q8NF37 534 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 VN1R2Q8NFZ6 395 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR6K2Q8NGY2 324 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR2AJ1Q8NGZ0 328 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR52N5Q8NH56 324 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR1L3Q8NH93 324 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RAB3IL1Q8TBN0 382 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 AGR3Q8TD06 166 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BLOC1S5Q8TDH9 187 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 C2orf15Q8WU43 125 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PTPMT1Q8WUK0 201 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GATAD1Q8WUU5 269 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 HEXDCQ8WVB3 486 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ANKRD49Q8WVL7 239 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 APOBEC4Q8WW27 367 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms