RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SORDQ00796 357 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 FOXF2Q12947 444 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 SKP2Q13309 424 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 GNA13Q14344 377 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 TOMM34Q15785 309 aaPredicted RBP16.25■□□□□ 0.19
SNX4-204ENST00000473417 TRMT5Q32P41 509 aaKnown RBP16.25■□□□□ 0.19
SNX4-204ENST00000473417 PLPPR5Q32ZL2 321 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 PEX5LQ8IYB4 626 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 OR5W2Q8NH69 310 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 NFKBIDQ8NI38 313 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 FAM222BQ8WU58 562 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 OIT3Q8WWZ8 545 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 WNT2BQ93097 391 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 GPATCH1Q9BRR8 931 aaKnown RBP16.25■□□□□ 0.19
SNX4-204ENST00000473417 SLC39A3Q9BRY0 314 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 CCDC106Q9BWC9 280 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 SFXN3Q9BWM7 321 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 SLC35A3Q9Y2D2 325 aa16.25■□□□□ 0.19
SNX4-204ENST00000473417 MTORP42345 2549 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 A0A0G2JPF8 293 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 A6NNC1 897 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 HNRNPCL2B2RXH8 293 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 HNRNPCL3B7ZW38 293 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 HNRNPCL1O60812 293 aaKnown RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 RCBTB2O95199 551 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 DBIP07108 87 aaKnown RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 LINGO3P0C6S8 592 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 HNRNPCL4P0DMR1 293 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 ARAFP10398 606 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 IL7RP16871 459 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 CBFBQ13951 182 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 TMEM44Q2T9K0 475 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 COQ5Q5HYK3 327 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 PLXDC2Q6UX71 529 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 VRK2Q86Y07 508 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 UBQLNLQ8IYU4 475 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 TOR1AIP2Q8NFQ8 470 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 OR52P1PQ8NH57 321 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 RP9Q8TA86 221 aaKnown RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 POC1BQ8TC44 478 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 GPR119Q8TDV5 335 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 WDR60Q8WVS4 1066 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 SMPDL3BQ92485 455 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 CNOT9Q92600 299 aaKnown RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 PMM1Q92871 262 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 ZBTB8AQ96BR9 441 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 POLDIP3Q9BY77 421 aaKnown RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 CLEC4MQ9H2X3 399 aaPredicted RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 RASSF1Q9NS23 344 aa16.24■□□□□ 0.19
SNX4-204ENST00000473417 PRRC2AP48634 2157 aaKnown RBP16.24■□□□□ 0.19
SNX4-204ENST00000473417 DSPPQ9NZW4 1301 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 LINC01387J3KSC0 135 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 PEPDP12955 493 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 RPS4Y1P22090 263 aaKnown RBP16.23■□□□□ 0.19
SNX4-204ENST00000473417 RYKP34925 604 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 CDK6Q00534 326 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 PLAURQ03405 335 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 FOXF1Q12946 379 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 QPRTQ15274 297 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 PIGWQ7Z7B1 504 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 KIF18BQ86Y91 864 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 TREML1Q86YW5 311 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 GTPBP8Q8N3Z3 284 aaPredicted RBP16.23■□□□□ 0.19
SNX4-204ENST00000473417 PCYOX1LQ8NBM8 494 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 ZNF524Q96C55 264 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 LRRC58Q96CX6 371 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 RNF145Q96MT1 663 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 MYLK2Q9H1R3 596 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 BCL2L10Q9HD36 194 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 NF1P21359 2839 aa16.23■□□□□ 0.19
SNX4-204ENST00000473417 TUBAL3A6NHL2 446 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 H0YC42 278 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 FXYD1O00168 92 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 SEC14L5O43304 696 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 PGM3O95394 542 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 OPN1LWP04000 364 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 COX4I1P13073 169 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 NID1P14543 1247 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 ZNF17P17021 662 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 ART1P52961 327 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 SUCLG1P53597 346 aaKnown RBP16.22■□□□□ 0.19
SNX4-204ENST00000473417 TPD52P55327 224 aaPredicted RBP16.22■□□□□ 0.19
SNX4-204ENST00000473417 SCARB2Q14108 478 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 DAZAP2Q15038 168 aaPredicted RBP16.22■□□□□ 0.19
SNX4-204ENST00000473417 ADRM1Q16186 407 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 CYP51A1Q16850 503 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 MRPL2Q5T653 305 aaKnown RBP16.22■□□□□ 0.19
SNX4-204ENST00000473417 NANOGP8Q6NSW7 305 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 ZNF836Q6ZNA1 936 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 GRAMD2AQ8IUY3 354 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 CMIPQ8IY22 773 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 GCNT2Q8N0V5 402 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 FAM71CQ8NEG0 241 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 FBXO27Q8NI29 283 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 BBS10Q8TAM1 723 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 NINJ1Q92982 152 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 INTS12Q96CB8 462 aaKnown RBP16.22■□□□□ 0.19
SNX4-204ENST00000473417 RCN3Q96D15 328 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 TMEM38AQ9H6F2 299 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms