RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 NUF2Q9BZD4 464 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 SAP130Q9H0E3 1048 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 BCO1Q9HAY6 547 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 RAI1Q7Z5J4 1906 aaPredicted RBP13.59□□□□□ -0.23
VTI1A-203ENST00000472892 A0A1W2PNR3 127 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 CPSF4O95639 269 aaKnown RBP13.59□□□□□ -0.23
VTI1A-203ENST00000472892 PLAUP00749 431 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 CSTAP01040 98 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 OR12D1P0DN82 309 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 PAX1P15863 534 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 ADSLP30566 484 aaPredicted RBP13.59□□□□□ -0.23
VTI1A-203ENST00000472892 SLC7A1P30825 629 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 CCR4P51679 360 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
VTI1A-203ENST00000472892 CASP9P55211 416 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 SESN3P58005 492 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 P2RY6Q15077 328 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 MAPK14Q16539 360 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 DPY19L1Q2PZI1 675 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 CEP85LQ5SZL2 805 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 SFRP5Q5T4F7 317 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 SAXO2Q658L1 398 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 TYW3Q6IPR3 259 aaKnown RBP13.59□□□□□ -0.23
VTI1A-203ENST00000472892 C16orf62Q7Z3J2 963 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 ANKRD46Q86W74 232 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 WFDC8Q8IUA0 241 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 FAM71CQ8NEG0 241 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 XAGE5Q8WWM1 108 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 TMEM234Q8WY98 164 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 RAB8BQ92930 207 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 S100PBPQ96BU1 408 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 NEURL3Q96EH8 262 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 PSD2Q9BQI7 771 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 GSX2Q9BZM3 304 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
VTI1A-203ENST00000472892 MEAF6Q9HAF1 191 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 KCNK9Q9NPC2 374 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 POLE3Q9NRF9 147 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 ACER3Q9NUN7 267 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 PNPOQ9NVS9 261 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 KLHL9Q9P2J3 617 aa13.59□□□□□ -0.23
VTI1A-203ENST00000472892 IGHV3-15A0A0B4J1V0 119 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 KIAA0513O60268 411 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 CYTIPO60759 359 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 CYP7B1O75881 506 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 H6PDO95479 791 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 ADAP00813 363 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 PGCP20142 388 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 PGM1P36871 562 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 SPANXN4Q5MJ08 99 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 ATAD3BQ5T9A4 648 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 C3orf33Q6P1S2 294 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF611Q8N823 705 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 HSD17B8Q92506 261 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 ROPN1LQ96C74 230 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 PERPQ96FX8 193 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
VTI1A-203ENST00000472892 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 SERINC1Q9NRX5 453 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 BTNL2Q9UIR0 455 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 SLC35A3Q9Y2D2 325 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 WDR45Q9Y484 360 aa13.58□□□□□ -0.24
VTI1A-203ENST00000472892 PRAMEF27A3QJZ7 478 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF724A8MTY0 619 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 HS3ST1O14792 307 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 SMAD9O15198 467 aaKnown RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF500O60304 480 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 TMCC2O75069 709 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 UBTFL6P0CB48 400 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 S100A3P33764 101 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 APOBEC1P41238 236 aaKnown RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 OR3A2P47893 321 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 LTBQ06643 244 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 BST1Q10588 318 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 FUT5Q11128 374 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 MERTKQ12866 999 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 ITGADQ13349 1161 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 TSC22D1Q15714 1073 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 FAM174BQ3ZCQ3 159 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 ADAM5Q6NVV9 412 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 TNFAIP8L2Q6P589 184 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 CLEC9AQ6UXN8 241 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 FRRS1Q6ZNA5 592 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 TMPPEQ6ZT21 453 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 CROCCP2Q86T23 111 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF75CPQ92670 426 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-203ENST00000472892 COX4I2Q96KJ9 171 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 TEX37Q96LM6 180 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 Q96MF0 132 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 CCDC115Q96NT0 180 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 OR5B2Q96R09 309 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 SLC35A5Q9BS91 424 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 BDH2Q9BUT1 245 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 CCDC106Q9BWC9 280 aa13.57□□□□□ -0.24
VTI1A-203ENST00000472892 ARID1AO14497 2285 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms