RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CPA3P15088 417 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 POLR2EP19388 210 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 CYP2B6P20813 491 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 IL32P24001 234 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 UGT1A3P35503 534 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 SAA4P35542 130 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 CDKN1BP46527 198 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ACTR3P61158 418 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 S100A12P80511 92 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 TNFRSF17Q02223 184 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 LIPEQ05469 1076 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 NCBP1Q09161 790 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 XRCC4Q13426 336 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 KLF5Q13887 457 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 DMC1Q14565 340 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 SPCS2Q15005 226 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 HERPUD1Q15011 391 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 MPPED2Q15777 294 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ZNF528Q3MIS6 628 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 DCAF4L1Q3SXM0 396 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 USP50Q70EL3 339 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 TRMT10CQ7L0Y3 403 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 BIVMQ86UB2 503 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 AKAP14Q86UN6 197 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 LRRC6Q86X45 466 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 CDKL3Q8IVW4 592 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 LRRC34Q8IZ02 419 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 KDM8Q8N371 416 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ZNF433Q8N7K0 673 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 ATAD1Q8NBU5 361 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 AKR7LQ8NHP1 331 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 RDH11Q8TC12 318 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ADAMTS16Q8TE57 1224 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 PAQR8Q8TEZ7 354 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 CCDC12Q8WUD4 166 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 LZICQ8WZA0 190 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 STARD8Q92502 1023 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 FBXO32Q969P5 355 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 MARC2Q969Z3 335 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 TMEM186Q96B77 213 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 EEF2KMTQ96G04 330 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 RPRD1AQ96P16 312 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 TRNT1Q96Q11 434 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 CYTH2Q99418 400 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 SELENOSQ9BQE4 189 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 JPH2Q9BR39 696 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 ZSCAN5AQ9BUG6 496 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 TPPP3Q9BW30 176 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 TBC1D10AQ9BXI6 508 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 RHBGQ9H310 441 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 TDRD3Q9H7E2 651 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 RMND5AQ9H871 391 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 C12orf10Q9HB07 376 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 MRM3Q9HC36 420 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 UXTQ9UBK9 157 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 SPASTQ9UBP0 616 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 SLC2A6Q9UGQ3 507 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 CDH7Q9ULB5 785 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 PAIP2BQ9ULR5 123 aaKnown RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 MAB21L2Q9Y586 359 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 U3KQV3 271 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 FHAD1B1AJZ9 1412 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 KIF27Q86VH2 1401 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 NPC1L1Q9UHC9 1359 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 FRMPD4Q14CM0 1322 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CECR2Q9BXF3 1484 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 FAM230AA0A1W2PPH8 454 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 GSAPA4D1B5 854 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 GOLGA8IPA6NC78 632 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 GOLGA8OA6NCC3 632 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 GOLGA8NF8WBI6 632 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 GOLGA8RI6L899 631 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 WRBO00258 174 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 HIP1O00291 1037 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 WWP2O00308 870 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CLDN3O15551 220 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 TRIM3O75382 744 aaPredicted RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 SURF6O75683 361 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 RBBP9O75884 186 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 ERLIN2O94905 339 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PTBP3O95758 552 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 LGI1O95970 557 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 GAS8O95995 478 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 AGTP01019 485 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CSTAP01040 98 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 AHCYP23526 432 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CFL1P23528 166 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 CD1BP29016 333 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PPP1R2P41236 205 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SLC11A1P49279 550 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SNU13P55769 128 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 UBE2HP62256 183 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PPIL2Q13356 520 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 MAB21L1Q13394 359 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 ZIC1Q15915 447 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 MOGQ16653 247 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 FAM83EQ2M2I3 478 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 USH1GQ495M9 461 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms