RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PAQR5Q9NXK6 330 aaPredicted RBP13.77□□□□□ -0.21
SDC3-203ENST00000471567 CLCF1Q9UBD9 225 aa13.77□□□□□ -0.21
SDC3-203ENST00000471567 PLEKHB1Q9UF11 243 aaPredicted RBP13.77□□□□□ -0.21
SDC3-203ENST00000471567 Q9UFV3 132 aa13.77□□□□□ -0.21
SDC3-203ENST00000471567 ANGPT4Q9Y264 503 aa13.77□□□□□ -0.21
SDC3-203ENST00000471567 ICE1Q9Y2F5 2266 aa13.77□□□□□ -0.21
SDC3-203ENST00000471567 ARL2BPQ9Y2Y0 163 aa13.77□□□□□ -0.21
SDC3-203ENST00000471567 ARHGAP21Q5T5U3 1957 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 A1L4Q6 167 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 CFAP73A6NFT4 308 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 KDM4EB2RXH2 506 aaPredicted RBP13.76□□□□□ -0.21
SDC3-203ENST00000471567 ADAMDEC1O15204 470 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 SEC14L5O43304 696 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 EFNA2O43921 213 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 GP1BBP13224 206 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 PRDX6P30041 224 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 PRKAR1BP31321 381 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 RYKP34925 604 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 APOBEC1P41238 236 aaKnown RBP13.76□□□□□ -0.21
SDC3-203ENST00000471567 GZMMP51124 257 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 SELENBP1Q13228 472 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 PDSS1Q5T2R2 415 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 ZNF550Q7Z398 422 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 TREML1Q86YW5 311 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 CCDC71Q8IV32 467 aaPredicted RBP13.76□□□□□ -0.21
SDC3-203ENST00000471567 LILRA2Q8N149 483 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 TNIP2Q8NFZ5 429 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 OR10A6Q8NH74 314 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 RCN3Q96D15 328 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 ADGRG7Q96K78 797 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 SLC39A3Q9BRY0 314 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 SERINC1Q9NRX5 453 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 RLIMQ9NVW2 624 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 AP3M1Q9Y2T2 418 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 ZNF175Q9Y473 711 aa13.76□□□□□ -0.21
SDC3-203ENST00000471567 PRORSD1PA6NEY8 169 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 H0YC42 278 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 EIF1AYO14602 144 aaKnown RBP13.75□□□□□ -0.21
SDC3-203ENST00000471567 ADAM11O75078 769 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 SERPINB7O75635 380 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 RCBTB2O95199 551 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 IL11P20809 199 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 FKBP2P26885 142 aaKnown RBP13.75□□□□□ -0.21
SDC3-203ENST00000471567 PCGF2P35227 344 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 HTR3AP46098 478 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 TPD52P55327 224 aaPredicted RBP13.75□□□□□ -0.21
SDC3-203ENST00000471567 MERTKQ12866 999 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 EPS8Q12929 822 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 CTU2Q2VPK5 515 aaKnown RBP13.75□□□□□ -0.21
SDC3-203ENST00000471567 RABL3Q5HYI8 236 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 DHRS4L2Q6PKH6 230 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 PLEKHM3Q6ZWE6 761 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 GRINAQ7Z429 371 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 ARPINQ7Z6K5 226 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 CALHM3Q86XJ0 350 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 ZZZ3Q8IYH5 903 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 CLIP4Q8N3C7 705 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 C9orf106Q8NAJ2 232 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 BHLHE22Q8NFJ8 381 aaPredicted RBP13.75□□□□□ -0.21
SDC3-203ENST00000471567 OR2V1Q8NHB1 315 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 KLHL15Q96M94 604 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 CCT8L2Q96SF2 557 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 PINK1Q9BXM7 581 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 ZNF629Q9UEG4 869 aaPredicted RBP13.75□□□□□ -0.21
SDC3-203ENST00000471567 CHST2Q9Y4C5 530 aa13.75□□□□□ -0.21
SDC3-203ENST00000471567 A0A0J9YW62 118 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 SLC22A20A6NK97 555 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 AIM2O14862 343 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 DCTN3O75935 186 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 FAM107AO95990 144 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 IL18BPO95998 194 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 CTSSP25774 331 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 HTR1EP28566 365 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 ACAA2P42765 397 aaKnown RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 IDH2P48735 452 aaKnown RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 PCBP3P57721 371 aaKnown RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 CDSNQ15517 529 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 SGCBQ16585 318 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 SLC25A35Q3KQZ1 300 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 INTS11Q5TA45 600 aaKnown RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 EEF1A1P5Q5VTE0 462 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 OR2A2Q6IF42 318 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 C3orf33Q6P1S2 294 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 HACD2Q6Y1H2 254 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 P4HA3Q7Z4N8 544 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 OR10D3Q8NH80 312 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 SLC25A43Q8WUT9 341 aaPredicted RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 HOPXQ9BPY8 73 aaPredicted RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 GPATCH1Q9BRR8 931 aaKnown RBP13.74□□□□□ -0.21
SDC3-203ENST00000471567 TMEM185BQ9H7F4 350 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 EVA1AQ9H8M9 152 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 CHST11Q9NPF2 352 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 KCNJ16Q9NPI9 418 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
SDC3-203ENST00000471567 SPIN1Q9Y657 262 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms